Protein

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Genbank accession
AMM43812.1 [GenBank]
Protein name
structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MLPFPRMFEYGNTIARWYTGNEVIAYDSSIFNSNGFTDYAGNTMRVGNVVFQLNGTTPSLGIGSPFGSGINLNQGYISTFKSTAQGIFTTSWCLDFYVKQNVVVTDGVAYCPVIFVNSNISNQEFSTRFEIDHFSTTQVFQNSGGALYAGNVSSNVYISNVFYHYAIQYLNGRLYFFKNGILVEEFSFNITGTTWQDLAIIGNFGRANPQSSYAVIDRYRLRTGQYFDISGFNLSTIYPGTKIS
Physico‐chemical
properties
protein length:244 AA
molecular weight: 27272,11070 Da
isoelectric point:6,07327
aromaticity:0,17213
hydropathy:-0,03852

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AMM43812.1
1 244
Domain Start End Length (AA) Confidence
N-terminal 1 179 179 0,1014
Central domain 180 233 55 0,1054
C-terminal 234 244 10 0,5050
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-179
Central
180-233
C-terminal
234-244

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage vB_PcaM_CBB
[NCBI] 		2772511 Uroviricota > Caudoviricetes > Mimasvirus >
Host Pectobacterium carotovorum subsp. carotovorum
[NCBI] 		555 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Pectobacterium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AMM43812.1 [NCBI]
Genbank nucleotide accession
KU574722 [NCBI]
CDS location
range 173132 -> 173866
strand -
CDS
ATGTTACCATTTCCAAGAATGTTTGAATACGGGAACACTATAGCACGTTGGTATACTGGAAATGAAGTTATTGCATATGACTCATCAATTTTCAATAGTAATGGCTTTACTGATTATGCAGGAAACACAATGAGAGTCGGTAATGTAGTTTTCCAGCTTAATGGAACTACTCCATCATTAGGAATTGGTTCTCCATTTGGTTCAGGAATTAATTTAAATCAAGGATACATCAGTACTTTTAAATCTACGGCTCAAGGCATTTTTACAACGTCATGGTGTCTTGATTTTTATGTGAAACAAAATGTTGTTGTAACAGATGGTGTTGCATATTGTCCAGTTATATTTGTCAATAGCAATATTTCTAATCAAGAATTCTCCACACGTTTTGAAATAGATCATTTTTCAACAACTCAAGTATTTCAGAATTCAGGTGGGGCATTGTACGCAGGAAACGTATCATCAAATGTTTACATAAGTAATGTATTCTATCACTATGCTATTCAATATCTCAACGGAAGATTATATTTTTTCAAAAATGGGATTCTTGTTGAAGAATTTTCATTTAATATTACCGGAACAACATGGCAAGACCTTGCTATAATTGGAAATTTCGGTCGAGCTAACCCTCAGTCGTCGTATGCGGTCATAGACCGTTACAGATTACGGACTGGTCAATATTTTGATATTTCAGGTTTTAATTTAAGTACAATTTATCCTGGTACAAAAATATCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
70ae2da0f4ea075af4effc0d03dde8bf9c12b9889e57f3e0acf278429e3c3e96
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5974
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50