Protein

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Genbank accession
YP_009788950.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,76
Protein sequence
MEQTDNYIGQWFNAIGVQQNYKTMQYFAGDGDASRTFEFNFDGGYISKSDVKAFAVKDDSRERIDYTLTFIGPNSVNLNAVVPVGWTVLIYRDTPKSRPLAKFIDGAVINAFNLDRNAQQAVFAVAEMVDRFDSVTADVETALTEVYKAITFSEQAVAEAQEATRVANESKAAALAAESSAAQAALDAAEANVTADSAKLIAEGIEGKADLAISTANTAKSTADTAKATADAAKVTAEGIEGKADAAIATANSAKTESAAAKTTSNEAKTTANAIDGKAQEALDKATQAQADVGTAVAGKVSKSGDTMVGPLILNADATDPRGAVTKQQLEQQGGAPLTSVLWWHMRSAIPAYYIPADGQILSRSLYPSVWQMISDGKVPVVPESTWLADPKWRGCYTAGNGVSTFRVPDYNGKSAGSYGAAFLRGDGAKSNGVPGTIQVDAIRNITGSFDYSNTANIIDNAPANKIISGAFKPTGNSVGRVNFTGTAYAAGSGVSFDASLAPGVIVADENRPVNATGCYILRMAGGYINAENIDAENLAQSISEMSTRIQVVENKIVDLQGHPYITKRIILPATHEYTRPGIRTEWSDGFVDIHGSAIGNGGVDTSFSFGGPVTVFFGAQLTEHYYNPGGASRNPYIQATYEDRITIRGGIGSDTFRVNVLVTGKWK
Physico‐chemical
properties
protein length:668 AA
molecular weight: 70544,57480 Da
isoelectric point:5,02243
aromaticity:0,08383
hydropathy:-0,19820

Domains

Domains [InterPro]
DC_0084
STR
1–665
DC_0084
IPR005604
ATT
23–131
IPR005604 Coil SSF88874 Coil
YP_009788950.1
1 668
Architecture
STR
ATT
STR
STR 1-22 | ATT 23-131 | STR 132-665 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage fHe-Yen3-01
[NCBI] 		1932893 Uroviricota > Caudoviricetes > Autographivirales > Melnykvirinae > Pokrovskaiavirus
Host Yersinia enterocolitica
[NCBI] 		630 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009788950.1 [NCBI]
Genbank nucleotide accession
NC_047805.1 [NCBI]
CDS location
range 36329 -> 38335
strand +
CDS
ATGGAACAGACAGATAATTATATTGGACAGTGGTTTAACGCCATTGGTGTGCAGCAGAACTACAAAACCATGCAGTACTTTGCAGGTGATGGTGATGCCTCACGTACCTTTGAGTTTAACTTCGACGGTGGCTACATTTCTAAAAGTGATGTTAAGGCGTTTGCTGTTAAAGACGACAGCCGGGAGCGCATTGACTACACACTCACATTCATCGGGCCTAACTCCGTTAACCTTAACGCAGTTGTGCCGGTAGGTTGGACAGTACTGATTTACCGGGATACACCAAAATCTCGCCCACTGGCTAAGTTCATTGATGGTGCTGTAATAAACGCATTCAACCTTGACCGAAACGCACAGCAGGCAGTATTCGCTGTGGCCGAGATGGTTGACCGGTTTGACTCCGTAACAGCAGACGTTGAGACGGCATTGACTGAAGTGTATAAGGCTATTACATTTTCAGAACAGGCTGTAGCAGAGGCACAGGAAGCTACACGGGTTGCTAACGAATCTAAGGCGGCCGCATTAGCAGCAGAGTCTAGCGCCGCTCAAGCAGCTTTAGATGCAGCGGAAGCTAACGTTACTGCTGACAGTGCTAAGTTGATTGCAGAAGGTATCGAAGGTAAGGCTGACCTGGCTATCTCAACAGCCAATACCGCTAAGTCTACAGCAGATACTGCAAAGGCTACAGCAGATGCTGCTAAGGTTACGGCAGAAGGTATCGAAGGTAAGGCAGATGCTGCTATCGCAACTGCCAACTCCGCTAAGACAGAATCGGCGGCAGCAAAGACCACGTCTAATGAAGCTAAAACTACAGCAAATGCTATTGATGGTAAAGCACAGGAAGCTCTGGACAAGGCTACTCAAGCACAGGCTGATGTCGGTACTGCTGTTGCTGGGAAGGTGAGTAAGTCCGGTGATACAATGGTTGGCCCACTTATCCTTAATGCCGATGCTACTGACCCACGTGGGGCTGTAACTAAGCAGCAGTTAGAGCAACAGGGTGGTGCTCCACTTACTTCGGTATTGTGGTGGCATATGCGCTCGGCTATACCAGCTTATTATATACCTGCGGATGGTCAAATATTATCTCGATCACTGTACCCTTCAGTTTGGCAAATGATATCAGATGGTAAGGTTCCGGTAGTTCCTGAATCAACCTGGTTGGCTGACCCTAAATGGCGTGGTTGTTATACAGCCGGTAATGGTGTATCTACATTTCGTGTACCCGACTATAATGGTAAGAGCGCTGGCTCTTATGGAGCAGCCTTCCTACGTGGCGATGGAGCTAAATCAAACGGAGTTCCAGGCACCATTCAGGTGGATGCCATTCGTAATATAACGGGTTCCTTTGATTACAGCAACACGGCTAACATAATAGATAACGCACCGGCAAATAAAATTATAAGTGGTGCATTTAAGCCAACAGGAAACTCCGTAGGGAGAGTAAACTTTACAGGGACAGCGTACGCAGCAGGTTCAGGTGTTTCATTCGATGCCTCTCTTGCTCCTGGTGTTATTGTTGCCGATGAGAACCGTCCAGTTAACGCAACAGGTTGTTATATACTACGTATGGCAGGTGGTTATATCAATGCGGAGAATATTGATGCTGAGAATTTAGCCCAGTCTATCTCCGAGATGTCTACACGTATTCAGGTAGTTGAGAATAAGATTGTAGACTTACAAGGTCACCCGTACATTACCAAGCGAATTATACTACCAGCAACACATGAGTATACTCGCCCAGGTATTCGTACTGAGTGGTCTGATGGGTTTGTAGATATCCACGGCAGTGCAATTGGTAACGGTGGTGTTGATACATCGTTCTCATTCGGTGGGCCTGTCACTGTGTTCTTTGGTGCGCAGTTAACTGAACACTATTATAACCCAGGCGGTGCATCACGTAACCCGTACATCCAAGCTACTTATGAAGATAGGATAACTATCCGAGGTGGTATTGGCTCTGATACATTCCGCGTAAACGTGCTAGTAACCGGTAAGTGGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
17d77dff851f2c411929f8a33ccb538f5a9877e4592fece62679ec4be9a191d7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7119
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and complete genome sequence of Yersinia bacteriophage, fHe-Yen3-01 Jun,J.W., Wicklund,A. and Skurnik,M. 2013-12 — GenBank