Protein

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Genbank accession
XYO02492.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MFNFTQISNRRIGKITLDVVTTEEHTSELSITDNPIESGAEIADHAVVKPKQITIVGVVVDHDHDGAGLNIPGVGNIRGVSDFLNGLPLPAKVISQTQQTIAKATRVASQVQGAIDTAKQAVNKVRSIAPFLPDFGLGGLLDNSDASGRVQKCYADLVSSQKSGETIEIQTGLLLYKNMMIESISVRQIKDGSAEFTITAREVFIVDTATVSKGKSSVAGKKKSGRAGVQSAAKTQQGTTQPSKPKEKSLLRRLF
Physico‐chemical
properties
protein length:255 AA
molecular weight: 27183,65610 Da
isoelectric point:9,38204
aromaticity:0,03922
hydropathy:-0,19373

Domains

Domains [InterPro]
DC_1370
STR
1–254
DC_1370
IPR048494
ATT
17–212
IPR048494
XYO02492.1
1 255
Architecture
STR
ATT
STR
STR 1-16 | ATT 17-212 | STR 213-254 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pasteurella phage Pmp3
[NCBI] 		3127679 Viruses >
Host Pasteurella multocida
[NCBI] 		747 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pasteurellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYO02492.1 [NCBI]
Genbank nucleotide accession
OR544134.1 [NCBI]
CDS location
range 16282 -> 17049
strand -
CDS
ATGTTTAATTTCACACAAATATCGAACAGACGTATCGGTAAAATTACACTTGATGTTGTGACGACAGAAGAGCATACGTCAGAACTCTCTATTACTGACAATCCAATTGAGAGTGGTGCTGAAATTGCCGATCATGCTGTGGTTAAACCTAAACAAATAACTATTGTTGGGGTTGTAGTTGATCACGACCACGACGGTGCAGGATTAAATATTCCTGGTGTTGGCAATATCAGAGGAGTAAGTGATTTTTTAAATGGTTTACCTCTTCCAGCTAAAGTGATTTCACAGACACAGCAAACCATTGCTAAAGCAACGCGTGTGGCGAGTCAAGTTCAAGGAGCTATTGATACCGCTAAACAGGCGGTTAATAAAGTGCGGTCAATTGCTCCCTTTTTACCTGATTTTGGGTTGGGTGGTCTATTAGATAATTCGGATGCAAGTGGTCGGGTACAAAAATGCTACGCAGATTTAGTATCGAGTCAGAAATCAGGGGAAACTATCGAAATTCAGACAGGGTTGTTGCTCTACAAGAATATGATGATTGAATCTATTTCAGTTAGGCAAATAAAAGATGGCAGTGCTGAATTCACGATAACAGCAAGAGAAGTTTTTATTGTTGATACTGCAACGGTTTCAAAGGGTAAATCCTCTGTAGCAGGGAAGAAAAAGAGCGGGCGAGCTGGAGTTCAATCGGCAGCTAAAACTCAGCAAGGTACAACACAGCCTAGTAAGCCAAAAGAAAAATCATTACTTAGACGTCTTTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
05d05cf010d752fee463c44cf9f29cbc4c3b426b63acae63e7bad31871125249
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6869
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50