Protein

View in Explore
Genbank accession
YP_009880322.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence GenBank
Probability 1,00
TSP
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNEMFSQGGKGSTGILTNKQAVARHFGVKQSEVVYFSVGVDLGGYKVIYDKETQRAYSLPVGIASGTTAVSLSTAAVLVHSAGSVDLGALAVSREEYVTLAGTFDSGSTLNVKNELLTYTDGKYRWDGALPKTVDAGSAPASSGGEGPGGWISVGDASLRSYLATNSGSGAVGYSFKGLVNASHRKVNEKLDEYASLWDFHCDSSGNVIQPGLSTDSRQYIQNAVDAISDAGGGTLVIPVGYTWYLNSTDPASGHSGIIQLKSNVNIQIEGTIKIGPALASSSFQIFVGFDNGSPAASGNLNNCHIYTNGNGTIDFGGYDFDNTSQLRNGIAFGKSYNCSVSRIIFQNGDITWAVTTGWNGYGSDCVVRKCRFINLIQSNNNADHSTVYINCPYSGVEGCTFRASSTRAQMIACTVELHQHDTWYRDSFIEGYVRGCYIALHGVEAAGAGTYIYNAVVSGVTGDISGQAIILAAGPDSVTTTHINGVSVENCRITAGNQAGMCSFIDFFQDSNSDSSQYLINHVTVKGCSFIVDRNRALSAAITINGSIQGITFQDNFFDVKQAMVSELPSGKTVQLVRFNWDESNIIGDDNTGTRNALNLFETRRVSSMTKCNISLRMRQPSPELFSLMYFRPNETTFSDCTFEVLPYNWSCTSGNPIVFETTDTPPSGMRVRFPKSISFTLPAGSNAQRATGGSGYSWVARADALDRRSISGQFDAPASYSGSSDGKLIGIGWQLDGVQHTYDHNVYLQNFT
Physico‐chemical
properties
protein length:754 AA
molecular weight: 80795,70740 Da
isoelectric point:5,55882
aromaticity:0,10080
hydropathy:-0,16857

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–95
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 G3DSA:6.10.20.90 IPR012334 G3DSA:2.40.30.250
G3DSA:3.30.2020.50
ATT
1–100
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR011050
IPR040775
RBD
91–156
IPR040775 IPR041303
YP_009880322.1
1 754
Architecture
ATT
STR
RBD
ATT 1-235 | STR 236-667 | RBD 669-753 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009880322.1
1 754
Domain Start End Length (AA) Confidence
N-terminal 1 211 211 0,9891
Central domain 212 682 472 0,9876
C-terminal 683 754 71 0,5315
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-211
Central
212-682
C-terminal
683-754

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EP75
[NCBI] 		2070200 Uroviricota > Caudoviricetes > Pantevenvirales > Cvivirinae > Kuttervirus
Host Escherichia sp.
[NCBI] 		1884818 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009880322.1 [NCBI]
Genbank nucleotide accession
NC_049433.1 [NCBI]
CDS location
range 132101 -> 134365
strand +
CDS
ATGAACGAAATGTTTAGTCAAGGTGGTAAAGGTTCAACTGGAATCTTAACCAATAAACAAGCAGTAGCCAGACACTTTGGAGTTAAACAATCTGAGGTTGTTTATTTCTCAGTTGGTGTAGATTTAGGTGGGTATAAAGTTATCTATGACAAGGAAACGCAAAGAGCTTATTCCTTACCTGTTGGTATTGCTTCTGGTACTACTGCCGTCAGTCTTAGTACTGCTGCTGTACTTGTACATTCAGCAGGTTCTGTAGACTTAGGTGCATTAGCTGTATCTCGTGAAGAATATGTTACCTTGGCTGGGACATTTGATTCTGGCTCTACGCTTAACGTTAAAAATGAATTACTTACTTATACAGATGGTAAGTATCGCTGGGATGGGGCATTACCTAAAACTGTCGATGCTGGTTCTGCCCCAGCTTCAAGCGGTGGAGAAGGTCCTGGTGGATGGATTAGTGTTGGTGATGCTTCTCTTCGATCTTATTTAGCAACGAACTCAGGTTCTGGCGCTGTTGGCTATAGCTTCAAAGGTCTTGTGAATGCATCCCATAGAAAAGTAAACGAGAAATTGGATGAGTATGCTAGCCTTTGGGATTTCCACTGTGACTCAAGTGGTAACGTCATCCAACCTGGGTTATCCACAGATAGCAGGCAGTATATTCAGAACGCGGTTGACGCTATTTCTGATGCTGGCGGTGGCACATTAGTTATTCCCGTTGGTTATACATGGTATCTAAACAGCACAGACCCTGCATCTGGGCACAGCGGTATTATTCAGCTCAAGAGTAATGTCAATATCCAGATTGAAGGAACCATAAAGATAGGTCCTGCATTAGCTTCTTCATCATTTCAGATATTCGTAGGGTTCGATAATGGAAGCCCGGCTGCATCAGGCAACCTGAATAACTGTCATATCTACACTAATGGCAATGGTACAATAGACTTTGGTGGATACGATTTTGATAACACTTCTCAATTAAGGAACGGTATTGCCTTTGGTAAGAGCTATAACTGTTCCGTGTCTCGTATTATCTTCCAAAATGGTGATATTACATGGGCCGTAACTACAGGCTGGAATGGGTACGGTAGTGATTGTGTGGTGCGGAAGTGCCGTTTCATTAACCTCATCCAGAGCAATAACAACGCAGACCACAGTACTGTTTACATCAACTGCCCCTACAGTGGTGTTGAGGGTTGTACATTCCGTGCCTCATCTACTCGTGCACAGATGATTGCTTGCACTGTAGAACTACACCAGCATGATACTTGGTACAGGGATTCTTTCATCGAAGGGTATGTACGTGGGTGCTACATTGCCCTGCATGGTGTAGAGGCGGCTGGGGCTGGTACTTATATCTACAATGCTGTTGTATCAGGCGTTACTGGTGACATCTCAGGTCAGGCTATTATATTAGCAGCAGGACCTGACTCCGTGACAACTACACACATCAATGGTGTTTCTGTGGAGAATTGCAGAATTACTGCTGGCAACCAAGCTGGAATGTGTAGCTTTATTGACTTCTTCCAGGATAGTAACTCTGACTCAAGCCAGTACCTTATTAACCACGTTACGGTTAAGGGGTGTAGTTTTATTGTAGACCGTAATCGTGCACTCAGTGCAGCAATAACAATTAACGGCAGCATACAGGGTATTACGTTCCAAGATAACTTCTTTGACGTTAAACAAGCCATGGTGTCTGAATTGCCTTCAGGAAAAACAGTGCAGTTAGTACGGTTTAACTGGGATGAAAGTAATATCATTGGTGATGATAACACTGGTACGCGTAATGCCCTCAATCTGTTCGAGACTCGGCGTGTCTCCAGTATGACCAAATGCAATATATCTTTGCGTATGCGTCAGCCAAGCCCAGAGTTATTTAGCCTTATGTATTTTAGACCAAATGAAACCACTTTCAGTGACTGTACATTTGAGGTACTGCCATACAACTGGTCGTGCACATCAGGAAACCCTATAGTTTTTGAAACTACAGATACCCCACCATCTGGAATGCGTGTTCGTTTTCCTAAGTCAATTTCATTTACGTTGCCTGCTGGTTCGAACGCCCAACGTGCTACAGGGGGTTCTGGTTATTCTTGGGTGGCTAGAGCAGATGCTCTTGATAGGCGTAGCATTTCTGGGCAATTTGACGCTCCGGCATCTTACTCCGGATCTAGTGATGGTAAATTGATTGGAATAGGGTGGCAGTTAGACGGAGTACAGCATACCTACGACCATAATGTGTATTTGCAAAACTTTACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b3af4aa1dfe485f3948e27bcdd501c01d377921242f88ee0b0138adc4d6326cf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6626
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50