Protein

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Genbank accession
QIG69983.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,71
Protein sequence
MAKVDGSVKSLLQGVSQQPPRDRLPGQATLQENMSSDPITGLTRRPATDLVNKLLTSADIRGWHDFDTKDGNKFIAAFYSNTVKVFDLNGTEQTVTVDANAQAYISLAGELRFNTIENDTYVVNRSKTVAMTTLQRSYYNNENRQVFIIQVLGGQYGRVYNVKINGTEYANYQVPNGSVATDVTSTRTKFIATELYNDLVANLTGWTVTLKDDIIVLSIANTNDYTVTVNDDYGNTNIKACGVTVARTEDLPRMAPHNYVVRVAEKTDPETDLWFRFIVEGYENDWTTTNSLSRFGQEGYWQETVAPLTDIELDPATMPHLLSYDAATGTFRFKRNTWANRAVGTTTSNPDPSFVDARITDVATFQGRLVFTSGPNVIMSRTDRDSDFWFGSASEQAESDPIDVRSKVEASTMQAIIQHNRDLVIFSNKGQFIIYGRTKITPANAALVLSSAFEAELRAKPVAAGRNVFFATNFGSYTGIREFYVESGTDINDSRAITQHVKRYIEGKVTKLISSSNYDTLLVQTDADAGVVYWYQYIGNDTEKVQSSWSKLSFSSPVVYMFFDEETVYFVTKDGTDYYLTRMSLDVQPSLDVGYHVHLDNRFDVFEVSTGFVLPYQYLKDTDLIAVQATACPNPGLTVPISSITDVPGTGWVVTLGADMFGGDIVVGSKFASKYIPTMPQVKDQDGVKVGTGNLVISKFKVSLSKTGEIIGQLLSKFGNGPEVRFNGRFVGDINNVVGEQPLSDDTFTLPFGQKADLAEILLSTSSHLPMTLLDIEWEGQYTKRGKRISTNTQSGG
Physico‐chemical
properties
protein length:797 AA
molecular weight: 88256,66950 Da
isoelectric point:5,01771
aromaticity:0,10414
hydropathy:-0,27290

Domains

Domains [InterPro]
IPR058003
TTP
1–789
IPR058003
QIG69983.1
1 797
Architecture
TTP
TTP 1-789 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG69983.1
1 797
Domain Start End Length (AA) Confidence
N-terminal 1 138 138 0,9904
Central domain 139 337 200 0,1653
C-terminal 338 797 459 0,1786
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-138
Central
139-337
C-terminal
338-797

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_Y48
[NCBI] 		2509782 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG69983.1 [NCBI]
Genbank nucleotide accession
MN988512 [NCBI]
CDS location
range 27907 -> 30300
strand +
CDS
ATGGCTAAGGTAGACGGAAGCGTCAAGTCCCTGCTACAGGGCGTCTCCCAACAGCCGCCGCGAGATCGGCTACCGGGTCAGGCTACTCTTCAAGAGAACATGTCGTCTGATCCGATAACCGGCCTTACTCGCCGCCCTGCCACAGACTTGGTAAACAAGCTGCTGACTAGCGCGGACATTCGCGGCTGGCACGACTTTGATACCAAAGACGGGAACAAATTCATCGCTGCATTCTACAGCAACACCGTCAAGGTGTTCGATCTGAATGGCACCGAGCAGACCGTTACGGTCGATGCAAACGCACAGGCTTACATCAGCTTGGCTGGTGAGCTTAGGTTCAACACTATCGAGAATGATACGTACGTCGTGAACCGCAGCAAGACAGTGGCTATGACCACGTTGCAGCGCAGCTACTACAACAACGAGAACAGACAGGTGTTCATCATCCAGGTTCTCGGCGGTCAGTATGGCCGTGTGTACAACGTCAAGATCAATGGCACCGAGTACGCGAACTATCAGGTTCCGAACGGCTCTGTTGCCACGGACGTTACCAGCACCAGAACCAAGTTCATTGCTACGGAGTTGTATAACGACCTCGTTGCGAACCTGACTGGCTGGACCGTGACGCTCAAGGACGACATCATTGTGCTGTCCATTGCGAACACGAATGACTACACGGTCACGGTCAACGACGACTACGGCAATACGAACATCAAGGCATGCGGCGTCACAGTGGCCCGCACCGAAGACCTGCCGCGCATGGCACCACACAACTACGTGGTTCGCGTGGCTGAGAAGACCGATCCGGAAACAGACCTTTGGTTCCGGTTCATTGTCGAGGGCTACGAGAACGACTGGACTACGACCAATAGCTTGAGCCGGTTCGGCCAAGAGGGCTATTGGCAGGAGACGGTTGCGCCGCTTACGGACATCGAACTCGATCCGGCCACCATGCCGCACCTGCTATCCTACGATGCAGCCACCGGCACATTCCGTTTCAAGCGGAACACCTGGGCCAATCGCGCAGTCGGCACGACCACCAGCAACCCGGACCCGTCCTTTGTTGACGCCCGCATCACAGACGTTGCCACGTTCCAAGGGCGACTGGTCTTTACCAGCGGGCCGAACGTCATCATGTCGAGGACAGACCGCGACAGTGACTTCTGGTTTGGCTCTGCTTCCGAGCAGGCCGAGAGCGATCCGATCGATGTACGGTCTAAGGTCGAGGCTTCGACCATGCAGGCCATCATCCAGCACAACCGCGATCTGGTCATCTTCTCGAACAAGGGTCAGTTCATCATCTACGGGCGCACCAAGATCACACCGGCTAACGCCGCCCTGGTCCTGTCGTCCGCCTTCGAAGCCGAGCTACGGGCTAAGCCTGTCGCGGCGGGCCGCAACGTGTTCTTCGCTACGAACTTTGGTTCCTATACGGGCATCAGAGAGTTCTATGTCGAGAGCGGCACGGACATCAACGACAGCCGCGCGATCACGCAGCACGTCAAGCGGTACATCGAAGGCAAGGTAACGAAGCTTATATCCAGTTCGAACTACGACACGCTGCTCGTCCAAACGGATGCAGACGCGGGCGTAGTGTATTGGTATCAGTACATCGGGAATGACACCGAGAAGGTGCAGTCCTCGTGGAGCAAGCTCAGCTTCTCTAGCCCTGTCGTGTACATGTTCTTCGATGAAGAGACGGTTTACTTCGTCACGAAGGACGGTACGGACTACTACCTTACGCGCATGAGCCTTGACGTACAGCCGTCGCTTGACGTTGGCTACCATGTCCATCTGGACAACAGGTTCGACGTGTTCGAGGTTAGCACCGGCTTTGTGCTGCCGTACCAGTACCTAAAGGATACGGACCTTATCGCGGTTCAGGCTACTGCCTGCCCCAACCCAGGACTGACCGTGCCTATAAGCAGCATCACCGATGTTCCCGGTACGGGATGGGTGGTGACGCTAGGCGCTGACATGTTTGGCGGTGACATCGTGGTAGGCTCCAAGTTCGCCAGCAAGTACATTCCGACAATGCCACAGGTCAAGGACCAGGATGGCGTGAAGGTTGGTACGGGCAATCTCGTTATCAGCAAGTTCAAGGTGTCTCTGTCCAAGACAGGCGAGATCATTGGACAGCTTCTAAGCAAGTTCGGTAACGGGCCGGAAGTACGGTTCAACGGTCGCTTCGTAGGCGACATCAACAACGTGGTCGGTGAGCAGCCGCTTAGCGACGATACATTCACCTTGCCCTTCGGACAGAAAGCAGACCTAGCGGAGATACTACTATCCACGTCTAGCCACCTGCCTATGACCCTGCTCGATATCGAGTGGGAAGGACAGTACACGAAGCGCGGAAAGCGCATCAGCACCAACACGCAGTCAGGAGGCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
d50e3aa1b3cfe4d92dc4ad4fb7fe04dec03e445b8dc7806e76636839c3299357
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3133
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank