Protein

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Genbank accession
WVX87556.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MNTGMLFIPARGLTISIQRFGKVRPVSRRVKSNPIYPSALYSPRNNLILEIRPIMSRSNKQKRRFMNNKAYDQLTSPLINEEDQVVDVDFVCDFDYSKLGCLNQITFINCRFGRLQYLGLYGVTFNGCEFMENIQYCNLNSAMFEQCTGVSNFVFCNMQNVGFKNCDLTGTHFETCDIDGATYEDCILRYAVFGTCYTDGGGKFINCNLKNVRLRGTTFGTDWEFINTTRFLDWRPMSEVGYDSSFMPGRCGTIHNSYLKDTGVAYYSITFPGHGETGRTLSAFVYPDDVEPTFCCGCFNGNEKELRDYINAEYDDPAVHKSRTFALETPLKTIEFDRDIRQVNNNKITRK
Physico‐chemical
properties
protein length:351 AA
molecular weight: 40200,15030 Da
isoelectric point:6,86379
aromaticity:0,12821
hydropathy:-0,37407

Domains

Domains [InterPro]
G3DSA:2.160.20.80
STR
95–231
G3DSA:2.160.20.80
G3DSA:2.160.20.80
STR
95–230
G3DSA:2.160.20.80
SSF141571
STR
115–218
SSF141571
WVX87556.1
1 351
Architecture
STR
STR 95-231 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVX87556.1
1 351
Domain Start End Length (AA) Confidence
N-terminal 1 99 99 0,0577
Central domain 100 309 211 0,9341
C-terminal 310 351 41 0,7913
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-99
Central
100-309
C-terminal
310-351

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage EniLVp02
[NCBI] 		3116828 No lineage information
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVX87556.1 [NCBI]
Genbank nucleotide accession
PP209424 [NCBI]
CDS location
range 153331 -> 154386
strand +
CDS
ATGAACACGGGTATGTTGTTCATACCAGCTCGGGGGCTGACCATATCCATACAACGATTTGGAAAGGTCAGACCTGTATCGCGTCGCGTGAAGTCGAACCCGATTTACCCGAGCGCATTATATTCACCCCGGAACAATCTAATACTGGAGATACGACCAATAATGTCACGCAGCAATAAGCAAAAACGCCGGTTTATGAACAATAAGGCATATGACCAACTGACGTCGCCACTTATCAACGAAGAAGATCAAGTCGTTGACGTCGACTTCGTTTGTGACTTCGATTATTCAAAGTTGGGCTGTCTAAACCAAATTACGTTCATCAATTGTCGATTTGGCAGATTGCAGTATTTGGGACTATACGGCGTCACATTCAATGGGTGTGAGTTCATGGAGAATATCCAATACTGTAATTTGAATTCTGCTATGTTCGAACAGTGCACCGGTGTATCTAACTTTGTCTTTTGTAATATGCAGAATGTGGGATTTAAGAACTGCGACCTCACCGGTACTCACTTTGAGACGTGTGATATTGACGGCGCCACATACGAAGATTGTATCCTGAGATATGCAGTATTCGGAACGTGTTATACCGATGGAGGTGGCAAGTTTATCAATTGCAATCTTAAGAATGTCAGGTTGAGAGGAACCACATTTGGCACGGATTGGGAATTTATCAACACAACCCGCTTCCTCGACTGGCGACCAATGTCCGAAGTTGGGTATGATTCGTCATTCATGCCCGGTCGCTGTGGCACTATCCACAACTCATATCTAAAGGACACCGGGGTCGCATATTATTCAATCACATTCCCCGGTCATGGTGAAACCGGTCGAACCCTGTCTGCGTTTGTTTATCCCGACGACGTCGAACCGACATTCTGCTGTGGTTGCTTTAACGGTAACGAGAAAGAACTCAGGGACTATATTAATGCGGAATATGATGACCCGGCTGTCCATAAATCCCGGACGTTCGCACTTGAAACCCCACTGAAAACCATTGAATTTGACCGCGACATCCGTCAGGTCAACAATAACAAGATAACAAGGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
42c568b9ae234c3024a09617b81dc9d7fbb02987a1e8538bfdc40290252f0082
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6346
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50