Protein

View in Explore
Genbank accession
YP_009832824.1 [GenBank]
Protein name
minor head protein
RBP type
TF
Evidence RBPdetect2
Probability 0,84
Protein sequence
MIHVLDFNDKIIDFLSTDDPSLVRAIHKRNVNDNSEMLELLISSERAEKFRERHRVIIRDSNKQWREFIINWVQDTMDGYTEIECIASYLADITTAKPYAPGKFEKKTTSEALKDVLSDTGWEVSEQTEYDGLRTTSWTSYQTRYEVLKQLCTTYKMALDFYIELSSNTVKGRYVVLKKKNSLFKGKEIEYGKDLVGLTRKIDMSEIKTALIAVGPENDKGKRLELVVTDDEAQSQFNLPTRYIWGIYEPQSDDQNMNETRLRSLAKTELNKRKSAVMSYEITSTDLEVTYPHEIISIGDTVRVKHRDFNPPLYVEAEVIAEEYNIISENSTYTFGQPKEFKESELREEFNKRLNIIHQKLNDNISNINTIVKDVVDGELEYFERKIHKNDTPPENPVNDMLWYDTSNPDVAVLRRYWNGRWIEATPNDVEKLGGITREKALFSELNNIFINLSIQHASLLSEATELLNSEYLVDNDLKADLQASLDAVIDVYNQIKNNLESMTPETATIGRLVDTQALFLEYRKKLQDVYTDVEDVKIAISDRFKLLQSQYTDEKYKEALEIIATKFGLTVNEDLQLVGEPNVVKSAIEAARESTKEQLRDYVKTSDYKTDKDGIVERLDTAEAERTTLKGEIKDKVTLNEYRNGLEEQKQYTDDQLSDLSNNPEIKASIEQANQEAQEALKSYIDAQDDLKEKESQAYADGKISEEEQRAIQDAQAKLEEAKQNAELKARNAEKKANAYTDNKVKESTDAQRRTLTRYGSQIIQNGKEIKLRTTKEEFNATNRTLSNILNEIVQNVTDGTTIRYDDNGVAQALNVGPRGIRLNADKIDINGNREINLLIQNMRDKVDKTDIVNSLNLSREGLDINVNRIGIKGGNNNRYVQIQNDSIELGGIVQRTWKGKRSTDDIFTRLKDGHLRFRNNTAGGSLYMSHFGISTYIDGEGEDGGSSGTIQWWDKTYSDSGMNGITINSYGGVVALTSDNNRVVLESYASSNIKSKQAPVYLYPNTDKVPGLNRFAFTLSNADNAYSSDGYIMFGSDENYDYGAGIRFSKERNKGLVQIVNGRYATGGDTTIESGMGKFNLVKRRDGNSYVSIQSYDLLAVGSDNAGDRVASNSIYKRTYSAPANLHITSAGTIGRATSAKKYKISIENQYINEDDQFSHSKEILKLPIRTWFDKYESEIMAKELESGKKLSDDTFKLSRHTGLIAEEVEELGFNEFVIYDDNGEIEGIAYDRLWVHLIPIIKNQQSKIEKLEELINE
Physico‐chemical
properties
protein length:1260 AA
molecular weight: 143389,15140 Da
isoelectric point:5,05096
aromaticity:0,08095
hydropathy:-0,67810

Domains

Domains [InterPro]
DC_0109
STR
1–639
DC_0109 Coil Coil IPR030392
IPR007119
Unmapped
25–336
IPR007119 DC_0536
IPR010572
ENZ
93–332
IPR010572
YP_009832824.1
1 1260
Architecture
STR
STR
STR 1-639 | STR 695-1260
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage IME1361_01
[NCBI] 		1965490 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009832824.1 [NCBI]
Genbank nucleotide accession
NC_048657 [NCBI]
CDS location
range 32833 -> 36615
strand +
CDS
GTGATACATGTTTTAGATTTTAACGACAAGATTATAGATTTCCTTTCTACTGATGACCCTTCCTTAGTTAGAGCGATTCATAAACGTAATGTTAATGACAATTCAGAAATGCTTGAACTGCTCATATCATCAGAAAGAGCTGAAAAGTTCCGTGAACGACATCGTGTTATTATAAGGGATTCAAACAAACAATGGCGTGAATTTATTATTAACTGGGTTCAAGATACGATGGACGGCTACACAGAGATAGAATGTATAGCGTCTTATCTTGCTGATATAACAACAGCTAAACCGTATGCACCAGGCAAATTTGAGAAAAAGACAACTTCAGAAGCATTGAAAGATGTGTTGAGCGATACAGGTTGGGAAGTTTCTGAACAAACCGAATACGATGGCTTACGTACTACGTCATGGACTTCTTATCAAACTAGATATGAAGTTTTAAAGCAATTATGTACAACCTATAAAATGGCATTGGATTTTTATATAGAGCTTAGTTCTAATACCGTCAAAGGTAGATATGTGGTACTCAAAAAGAAAAACAGCTTATTCAAAGGTAAAGAAATTGAGTATGGTAAAGATTTGGTTGGGTTAACTAGGAAGATTGATATGTCAGAAATCAAAACAGCATTAATTGCTGTGGGACCCGAAAATGACAAAGGAAAGCGTTTAGAGTTAGTTGTGACTGATGACGAAGCACAAAGTCAATTCAACTTACCTACCCGTTATATTTGGGGAATATACGAACCTCAATCAGATGATCAAAATATGAATGAAACACGGTTGCGTTCTTTAGCCAAAACAGAGTTAAATAAACGTAAGTCGGCAGTTATGTCATATGAGATTACTTCTACTGATTTGGAAGTTACGTATCCGCACGAGATTATATCAATTGGTGATACAGTCAGAGTAAAACATAGAGATTTTAACCCGCCATTGTATGTAGAGGCAGAAGTTATTGCCGAAGAATATAACATAATTTCAGAAAATAGCACATATACATTCGGTCAACCTAAAGAGTTCAAAGAATCAGAATTACGAGAAGAGTTTAACAAACGATTGAACATAATACATCAAAAGTTAAACGATAATATTAGCAATATCAACACTATAGTTAAAGATGTTGTAGATGGTGAATTAGAATACTTTGAACGCAAAATACACAAAAATGATACACCGCCAGAAAATCCAGTCAATGATATGCTTTGGTATGATACAAGTAACCCTGATGTTGCTGTCTTGCGTAGATATTGGAATGGTCGATGGATTGAAGCAACACCAAATGATGTTGAAAAATTAGGTGGTATAACAAGAGAGAAAGCGCTATTCAGTGAATTAAACAATATTTTTATTAATTTATCTATACAACACGCTAGTCTTTTGTCAGAAGCTACAGAATTACTGAATAGCGAGTACTTAGTAGATAATGATTTGAAAGCGGACTTACAAGCAAGTTTAGACGCTGTGATTGATGTTTATAATCAAATTAAAAATAATTTAGAATCTATGACACCCGAAACTGCAACGATTGGTCGGTTGGTAGATACACAAGCTTTATTTCTTGAGTATAGAAAGAAATTACAAGATGTTTATACAGATGTAGAAGATGTCAAAATCGCTATTTCAGATAGATTTAAATTATTACAGTCACAATACACTGATGAAAAATATAAAGAAGCGTTGGAAATAATAGCAACAAAATTTGGTTTAACGGTGAATGAAGATTTGCAGTTAGTCGGAGAACCTAATGTTGTTAAATCAGCTATTGAAGCAGCTAGAGAATCCACAAAAGAACAATTACGTGACTATGTAAAAACATCGGACTATAAAACAGACAAAGACGGTATTGTTGAACGTTTAGATACTGCTGAAGCTGAGAGAACGACTTTAAAAGGTGAAATCAAAGATAAAGTTACGTTAAACGAATATCGAAACGGATTGGAGGAACAAAAACAATATACTGATGACCAGTTAAGTGATTTGTCCAATAATCCTGAGATTAAAGCAAGTATTGAACAAGCAAATCAAGAAGCGCAAGAAGCTTTAAAATCATACATTGATGCTCAAGATGATCTTAAAGAGAAGGAATCGCAAGCGTATGCTGATGGTAAAATTTCGGAAGAAGAGCAACGCGCTATACAAGATGCTCAAGCTAAACTTGAAGAGGCAAAACAAAACGCAGAACTAAAGGCTAGAAACGCTGAAAAGAAAGCTAATGCTTATACAGACAACAAGGTCAAAGAAAGCACAGATGCACAGAGGAGAACACTGACTCGCTATGGTTCTCAAATTATACAAAATGGTAAGGAAATCAAATTAAGAACTACTAAAGAAGAGTTTAATGCAACCAATCGTACACTTTCAAATATATTAAACGAGATTGTCCAAAACGTTACAGATGGAACAACAATCAGATATGATGATAACGGAGTGGCTCAAGCTTTAAATGTGGGGCCACGTGGTATTAGATTAAATGCTGATAAAATTGATATTAACGGTAATAGAGAAATAAACCTTCTTATCCAAAATATGCGAGATAAAGTAGATAAAACCGATATTGTCAACAGCCTTAATTTATCAAGAGAGGGTCTTGATATCAATGTTAATAGAATTGGAATTAAAGGCGGTAACAATAACAGATATGTTCAAATACAGAATGATTCTATTGAACTAGGTGGTATTGTGCAACGAACTTGGAAAGGCAAACGATCAACCGATGATATATTCACACGTCTTAAAGATGGACATCTAAGGTTTAGAAATAATACCGCAGGCGGTTCACTTTATATGTCACATTTTGGTATTTCAACATATATTGATGGAGAAGGCGAAGACGGAGGTTCATCCGGTACTATTCAATGGTGGGATAAAACTTACAGTGATAGCGGTATGAATGGCATAACAATCAATTCCTATGGTGGTGTCGTTGCACTAACGTCAGATAATAATCGGGTTGTTCTGGAGTCTTACGCTTCATCGAATATCAAAAGCAAACAGGCACCGGTGTATTTATATCCAAACACAGACAAAGTGCCTGGATTAAACCGATTTGCATTCACGCTGTCTAATGCAGATAATGCTTATTCGAGTGACGGTTATATTATGTTTGGTTCTGATGAGAACTATGATTACGGTGCGGGTATCAGGTTTTCTAAAGAAAGAAATAAAGGTCTTGTTCAAATTGTTAATGGACGATATGCTACAGGCGGAGACACTACAATTGAATCAGGTATGGGCAAATTCAACTTAGTTAAACGAAGAGATGGAAATAGTTACGTTAGCATTCAAAGTTATGATTTATTGGCGGTAGGTTCTGATAATGCTGGCGATAGAGTCGCTTCTAATTCTATTTATAAGCGTACTTATTCAGCACCTGCTAACTTACACATTACTTCTGCTGGAACAATTGGGCGTGCTACTTCTGCCAAAAAGTATAAAATTTCAATTGAAAACCAATACATCAATGAAGACGATCAGTTCAGTCATTCAAAAGAGATTTTAAAGCTTCCAATTCGTACATGGTTTGACAAATATGAATCGGAAATAATGGCTAAAGAATTGGAAAGTGGTAAAAAGTTATCTGATGATACTTTTAAACTTAGTCGACATACTGGCTTAATAGCGGAAGAGGTTGAAGAATTAGGATTTAATGAATTTGTTATTTATGATGACAACGGAGAAATCGAAGGTATCGCATACGATAGACTTTGGGTTCATTTAATACCTATTATTAAAAACCAGCAATCAAAAATCGAAAAACTGGAGGAATTAATAAATGAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c756c73264cd3b10acf5e4104758c1eed5a744bd9b661a7a0e154d8a36c4198f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3141
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Analysis of active prophages from bacterial high-throughput sequencing data Sun,Q., Zhang,X., Xing,S. and Tong,Y.-G. 2018-12-28 — GenBank