Protein

View in Explore
Genbank accession
QBQ73483.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,76
Protein sequence
MSTSISYNPSSGFNGRINGVELIYQTDKPITRPDESPLEIGDRWYNPNTGIEGFWNGTYWLRRPQPISISSGATITNTSGFTYAGGFPVNHNSSRVSPMPILNGLCNPYLVSKVIAMVYTDSAPSTWDDQNFWRMGIRAGGTPADFGHDLVSIDFDSFTFASTALNASATPYLAEITPNIVFNDHNKPNLDITLVFTKIGLPSNLSHFFVTLFYSLVL
Physico‐chemical
properties
protein length:218 AA
molecular weight: 24032,65010 Da
isoelectric point:5,19653
aromaticity:0,12844
hydropathy:-0,12248

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Nodularia phage vB_NspS-kac65v162
[NCBI] 		2557581 Uroviricota > Caudoviricetes > Ravarandavirus >
Host Nodularia spumigena
[NCBI] 		70799 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBQ73483.1 [NCBI]
Genbank nucleotide accession
MK605244 [NCBI]
CDS location
range 27968 -> 28624
strand +
CDS
ATGAGTACAAGTATTTCTTATAACCCATCATCGGGGTTTAATGGGCGCATAAATGGGGTTGAACTTATTTATCAAACCGATAAACCAATAACAAGACCAGACGAATCTCCCTTAGAAATAGGTGATAGGTGGTACAATCCAAATACAGGTATAGAAGGTTTTTGGAATGGTACTTACTGGTTACGCAGACCTCAACCGATCTCAATATCTTCCGGTGCAACAATAACAAATACTTCTGGTTTTACTTACGCTGGTGGGTTTCCCGTTAACCATAATAGTTCAAGAGTAAGTCCGATGCCTATCTTGAACGGATTGTGTAATCCTTATTTAGTATCTAAGGTTATTGCGATGGTCTACACTGACTCCGCTCCTAGTACCTGGGATGATCAAAATTTCTGGCGTATGGGGATACGCGCTGGCGGAACTCCCGCAGATTTTGGACATGATCTTGTTTCAATCGATTTTGATAGTTTCACTTTTGCCTCTACCGCCCTCAATGCCTCGGCAACTCCCTACCTTGCAGAAATTACCCCTAATATTGTTTTTAATGATCACAATAAACCGAACCTGGATATTACCCTTGTATTTACCAAAATTGGCTTACCAAGTAACCTTTCTCACTTTTTTGTAACATTATTTTATTCTCTTGTTTTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
635c318cbe9280192724d843915dc9ebbe7e166842f09426b920c9e2043e0874
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6545
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diversity and diversification of Nodularia spumigena cyanophages in the Baltic Sea Sulcius,S., Holmfeldt,K. and Simoliunas,E. — — GenBank