Protein

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Genbank accession
AUR93688.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,80
Protein sequence
MAKYYLFTGREYITLNSAIGTEVGDTITVDFTWHNLYPEEEGLQWLFSYWSGAHIIKDADGVSYPNNCFLGYIRTTQDDVFAVEHQSRHTVTFNVIENGLVDAIALGADGGLNFTGIIHSVTINTANNGSRIYNIDDGWENNPVIADSSGSDSHATAYNFSATNWINDGEERTSVTANSHAVIMAPTEPRSFGVKTIASSIAVILKPLPPIQRKGNITIIQTEDIFRDPNLYDMAMYADRGMQSEEVFWQHTLPVNVMVHAGAPFSTGILGSPTIDPIQIDVSVRGDVVGSFYWKGGQTEATVTWANSVLIPKGDEVILTVVQADVTVTAISINLLGAYT
Physico‐chemical
properties
protein length:340 AA
molecular weight: 37148,04480 Da
isoelectric point:4,55698
aromaticity:0,10000
hydropathy:-0,03412

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR93688.1
1 340
Domain Start End Length (AA) Confidence
N-terminal 1 137 137 0,1435
Central domain 138 329 193 0,0907
C-terminal 330 340 10 0,9984
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-137
Central
138-329
C-terminal
330-340

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.188.B._10N.286.51.A6
[NCBI] 		1881218 No lineage information
Host Vibrio breoganii
[NCBI] 		553239 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR93688.1 [NCBI]
Genbank nucleotide accession
MG592555.1 [NCBI]
CDS location
range 19731 -> 20753
strand +
CDS
ATGGCTAAATACTATCTTTTCACAGGGCGTGAGTACATCACGCTAAACAGTGCTATTGGTACTGAAGTTGGGGATACGATTACCGTAGACTTTACTTGGCATAACTTGTATCCAGAAGAAGAAGGATTGCAATGGCTCTTTAGTTACTGGTCAGGTGCTCACATCATCAAAGATGCGGATGGGGTTTCCTACCCAAATAACTGTTTCTTGGGATATATCCGAACCACTCAAGATGATGTGTTTGCCGTAGAGCATCAATCACGTCACACCGTTACATTTAATGTAATTGAAAATGGACTCGTTGATGCCATTGCTCTGGGTGCGGATGGAGGTTTGAACTTCACGGGTATTATCCACAGTGTCACCATCAATACTGCTAACAATGGTTCCCGCATCTACAACATAGATGACGGATGGGAGAACAATCCTGTCATAGCTGACAGCAGTGGTAGTGATAGTCATGCTACTGCCTATAACTTCTCGGCTACTAACTGGATCAATGATGGGGAAGAAAGAACGTCAGTAACCGCAAATAGCCATGCTGTTATAATGGCACCCACTGAACCAAGGTCATTTGGGGTAAAAACCATAGCATCTAGTATTGCTGTGATTTTGAAGCCTCTACCTCCGATACAACGCAAAGGCAACATTACCATCATTCAAACAGAGGACATCTTCCGAGACCCTAACCTCTATGACATGGCTATGTATGCTGACAGAGGTATGCAATCTGAGGAAGTTTTCTGGCAACACACTTTACCTGTGAATGTCATGGTACACGCAGGTGCTCCATTCTCTACAGGGATACTTGGCTCCCCTACAATTGACCCTATCCAAATAGATGTGAGTGTACGGGGTGATGTAGTTGGTTCATTCTATTGGAAAGGAGGCCAAACTGAAGCAACAGTTACATGGGCAAACTCTGTTTTAATTCCCAAGGGTGATGAAGTGATACTTACCGTAGTACAGGCAGATGTTACTGTCACCGCTATCTCAATTAATTTATTAGGAGCATATACATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
bdc019fea41d03decd7642e544c6fa96ab4b88c43e24f4d7cdce571709e2a67d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6699
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank