Protein

View in Explore
Genbank accession
QZI86143.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSNLSFVRSVGDGTNRQFLLSNAGTNIGYFRTSDIHAYVDDVEVTFTINAASPHIAVLDEAPALGADVLLRREMPVTAPYANFERGNNFGHRQVNNTFVQQLYLTQEMLDGFAPDGYYMKQELDMGFHKVINLLPADADGDAVEFKQWYDKNVVQDGRIQDLEQSLAQGNLIYRRVVFTATEGQTEFNPNARFGAILNLYINGVNQIAGEAYENVDGSIIRTMPLDEGDRVVAIIGQEPQFQEPEQTDFRYVRYPYFATGGELSYMLPADAEQVLSVFINGIHQTSGEAYSFDKVSNVVTYAEALEGGDSVVIYAGSEPAVEGDASNLPVTTTDGSWTATLRTIAQRVLDIFNFSEINVKSYGAKGDGLTNDTVAITAASDKAHATGKSLYFPAGHYLMTKPLELSTHTYGDGYKVTKVEFIEGFTNPEPDAGLEKRYMAVYNRNYLRDYDADTADKFDLHKIHFHMSQVDSEPRTAAVYGTSNTDGVNVYHCKITSEGKADGTLTAGARTSMSFYDGNKNMNIYNNCIEDNINKAAGGCIWLQGGSGRTDETKSSSNIRIWGNLFKQKRPYDGDECIGLYGAGGILRDVDVYNNTLILEGGGQGISVFATANNAETFSKLYNVNIRNNTLITDLQYNSIRIGGQNLPEMIENVSVTGNVIYMKTPNASSSYGIRATETAKGVRIEGNAVVNVGTVKISRGISGWSPDQQTKATGNYVIGSFQYGIQNCFTCQDNIIDGADFGTDNCVDVRNNYLWDIKTYIFRATSSWSYVFADNRANMTNGTYAVYTTSAFTGTLSVRDNDIILDDAATRAGLYQGSGEVVMQDNKFYGTGRTPAGVMQRASGNYYFDVWDDYAPDTSKHGDLRLALPIGHVVQNSAPVVDGNSNLLDGWSLDTARAWQPRYIKTVSA
Physico‐chemical
properties
protein length:910 AA
molecular weight: 99992,63660 Da
isoelectric point:4,79888
aromaticity:0,10659
hydropathy:-0,34901

Domains

Domains [InterPro]
DC_0019
STR
1–249
DC_0019 IPR012334
IPR011050
STR
356–697
IPR011050
IPR012334
STR
357–729
IPR012334
IPR024535
ENZ
357–506
IPR024535 DC_1468
QZI86143.1
1 910
Architecture
STR
STR
RBD
STR 1-249 | STR 355-729 | RBD 730-852 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QZI86143.1
1 910
Domain Start End Length (AA) Confidence
N-terminal 1 373 373 0,9942
Central domain 374 846 474 0,9915
C-terminal 847 910 63 0,9336
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-373
Central
374-846
C-terminal
847-910

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 15E36.1
[NCBI] 		2859290 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio crassostreae
[NCBI] 		246167 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZI86143.1 [NCBI]
Genbank nucleotide accession
MW865291.1 [NCBI]
CDS location
range 41945 -> 44677
strand +
CDS
ATGAGTAACCTATCCTTTGTGCGTAGTGTTGGTGACGGGACTAATCGACAGTTCCTATTATCCAATGCTGGTACGAACATAGGTTACTTCCGCACTTCTGATATACATGCGTATGTTGATGATGTTGAAGTAACCTTTACAATTAATGCTGCATCACCGCACATAGCCGTGCTAGATGAAGCCCCTGCGCTTGGTGCTGATGTTCTCTTACGAAGAGAGATGCCAGTAACTGCGCCTTATGCAAACTTTGAACGAGGTAACAACTTCGGTCATCGTCAAGTGAACAATACCTTTGTGCAGCAACTGTACTTGACTCAAGAGATGCTTGATGGCTTTGCGCCAGACGGCTACTACATGAAGCAAGAGCTTGACATGGGCTTCCATAAAGTAATCAATCTACTGCCAGCAGATGCTGATGGGGATGCTGTGGAGTTCAAACAGTGGTATGACAAGAACGTTGTACAAGATGGTCGTATTCAAGACCTAGAACAATCCCTTGCACAAGGTAATCTCATCTATCGTCGTGTTGTGTTTACAGCAACTGAAGGTCAGACTGAGTTCAACCCTAACGCTCGGTTCGGTGCTATCTTGAACCTGTACATTAATGGTGTTAACCAGATTGCTGGTGAAGCATATGAGAATGTAGATGGTAGTATTATCCGTACTATGCCCCTTGATGAAGGTGACAGGGTTGTTGCTATCATTGGACAAGAGCCTCAGTTTCAAGAACCAGAGCAGACAGACTTCCGTTATGTAAGATACCCATACTTTGCAACGGGCGGTGAGCTAAGTTACATGCTGCCCGCTGATGCAGAACAGGTGCTATCTGTCTTCATAAATGGCATACATCAAACTTCAGGGGAAGCATACAGCTTTGATAAAGTTAGTAATGTTGTCACGTATGCAGAAGCACTTGAAGGTGGCGACAGCGTGGTTATCTACGCAGGTAGTGAGCCAGCAGTTGAAGGCGACGCAAGTAATCTTCCCGTAACAACAACTGATGGCTCATGGACGGCTACTCTACGCACTATTGCACAACGTGTTCTTGACATATTCAACTTTAGTGAGATTAACGTAAAGTCCTATGGTGCAAAAGGTGATGGGCTTACTAATGATACTGTCGCAATTACAGCAGCATCTGATAAAGCACATGCTACTGGTAAGTCACTGTATTTCCCAGCAGGTCACTACCTTATGACCAAGCCCCTTGAACTAAGTACCCATACCTATGGGGATGGATACAAAGTTACTAAGGTAGAATTTATTGAAGGGTTCACAAACCCAGAACCTGACGCTGGACTAGAGAAGAGGTATATGGCAGTCTATAATCGTAACTACTTACGTGACTACGATGCAGATACAGCGGATAAGTTTGACCTTCATAAGATACATTTTCACATGTCTCAAGTTGACTCCGAACCTAGAACAGCAGCCGTGTACGGTACATCTAATACCGATGGTGTTAACGTGTATCATTGCAAGATTACCTCAGAAGGTAAAGCTGATGGCACGCTGACCGCAGGTGCTCGTACTTCTATGTCATTCTATGATGGCAATAAGAATATGAATATCTACAACAACTGTATTGAAGATAATATCAACAAAGCGGCTGGTGGGTGTATCTGGCTGCAAGGCGGCTCTGGTAGAACTGATGAAACTAAGTCATCTTCTAACATTAGAATCTGGGGTAACTTGTTCAAACAAAAGCGACCTTATGATGGTGATGAGTGTATCGGGCTATATGGGGCAGGTGGTATACTAAGGGATGTTGATGTATATAATAACACACTAATACTAGAAGGAGGTGGTCAAGGTATCTCTGTGTTCGCAACTGCCAATAACGCTGAGACATTCAGCAAGCTGTATAATGTGAACATAAGAAACAATACGCTTATAACTGACTTGCAGTATAACTCCATACGTATTGGTGGACAGAACCTACCAGAGATGATAGAGAATGTCTCTGTCACTGGCAACGTCATTTACATGAAAACACCGAACGCATCTTCGTCTTATGGTATTCGTGCAACGGAGACAGCTAAGGGGGTTCGTATTGAAGGTAATGCGGTGGTGAACGTAGGTACTGTTAAAATCAGCCGAGGTATATCAGGGTGGTCTCCAGACCAACAAACCAAGGCGACTGGTAACTATGTAATAGGTTCATTCCAGTATGGGATACAGAACTGCTTTACGTGTCAGGATAATATCATAGATGGTGCAGACTTCGGCACAGACAATTGTGTGGACGTACGTAACAACTACCTATGGGATATTAAGACATACATATTCCGAGCAACATCTAGCTGGTCGTACGTGTTTGCTGATAACAGAGCAAACATGACTAACGGAACTTACGCAGTGTACACAACAAGCGCATTCACTGGTACATTATCAGTAAGAGATAATGATATTATACTAGATGATGCAGCTACTCGTGCTGGGCTATATCAAGGCTCAGGTGAAGTTGTGATGCAGGACAATAAGTTCTATGGGACTGGGCGTACACCAGCAGGTGTAATGCAACGTGCATCTGGTAACTACTACTTTGATGTGTGGGATGACTATGCACCAGATACTAGTAAGCACGGTGACTTACGCTTAGCACTGCCAATTGGGCATGTTGTACAGAACTCCGCTCCTGTAGTAGATGGTAACTCTAATCTATTAGATGGGTGGTCACTTGATACGGCAAGGGCGTGGCAGCCTAGATACATAAAGACAGTATCAGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bb7f818949008b9fee575e80c8a9cf74645e626a92b6f6ffd6e6a41cf9e892c5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2890
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Rapid evolution of virus immunity in the wild Piel,D., Bruto,M., Labreuche,Y., Blanquart,F., Chenivesse,S., Lepanse,S., James,A., Garcia Cruz,R., Dubert,J., Petton,B., Lieberman,E., Wegner,M.K., Hussain,F.A., Kauffman,K.K., Polz,M.F., Gandon,S., Bikard,D. and Le Roux,F. 2024-02-09 — GenBank