Protein

View in Explore
Genbank accession
XYH92039.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAITTVYTYPLNGSQQDFSVPFEYLARRFVSVTLIGTAGRRKLILTTDFRFTSSTNIRTNTLWTPSSGYSWIEVRRETSASDRLVDFTDGSILRASDMNVSQVQTLHVAEEARNAVTDTIGTDTNGNLDARGRRIVNLSDASLDSDAITYGQVKSLGTGAYQSANAAKASENAAKASENAAASSALAASNSKNAAAASEVASLASKNAAAASEGAALTYKNAAAASAGEALNSKNAAATSASEALSSKNAAATSAGEAALNASTVLSHIASYGANPVGTIVMALKDALPGHLLLNGATFDRTEYPELYGYLGTNVLPDWRGRYLKGADGTNLGTFAAGAMPSHTHTTPDHTHTTPDHTHTGATESAGVHQHGGSTSAGGSHQHGIYASGNNTSYGRQGTGSGPGDWTASTSWAGDHAHSIVTSWDGAHTHAVTIYSGGGGTTGSAGAGTTGSAGTGNKVETDRIHVNFFIKAKGLAQA
Physico‐chemical
properties
protein length:478 AA
molecular weight: 48936,68590 Da
isoelectric point:6,40294
aromaticity:0,06485
hydropathy:-0,29979

Domains

Domains [InterPro]
DC_0657
STR
1–476
DC_0657
IPR005604
ATT
3–130
IPR005604 SSF88874
IPR037053
ATT
274–325
IPR037053
IPR011083
ATT
278–323
IPR011083
XYH92039.1
1 478
Architecture
ATT
STR
ATT
STR
ATT 1-130 | STR 131-273 | ATT 274-325 | STR 326-476 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage phTUNSm
[NCBI] 		3425131 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas asplenii
[NCBI] 		53407 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYH92039.1 [NCBI]
Genbank nucleotide accession
PV620261.1 [NCBI]
CDS location
range 33884 -> 35320
strand +
CDS
ATGGCGATTACAACCGTTTATACCTATCCGTTGAACGGGAGCCAGCAGGACTTTTCGGTCCCCTTCGAGTACCTCGCACGGCGCTTTGTGTCCGTCACCTTGATTGGTACTGCGGGTAGACGAAAGCTGATCCTCACAACGGACTTCAGGTTCACTTCAAGCACGAACATCAGGACCAACACCCTGTGGACACCTTCCTCAGGTTATTCCTGGATTGAGGTTCGCCGGGAGACCAGCGCGTCTGACCGCTTGGTGGACTTCACCGATGGCTCCATCCTCCGAGCATCTGACATGAACGTGTCTCAGGTTCAGACTCTGCATGTGGCCGAAGAGGCCCGTAACGCGGTGACGGACACCATTGGTACTGACACCAACGGGAACCTCGATGCCCGTGGTCGCCGCATTGTTAACTTGTCGGACGCAAGCCTGGACTCTGATGCCATCACCTACGGTCAGGTCAAGAGCCTGGGCACTGGTGCATACCAGTCGGCAAATGCTGCGAAGGCCAGTGAGAATGCTGCGAAGGCCAGTGAGAATGCTGCTGCGTCCTCTGCACTCGCTGCGTCCAACTCAAAGAACGCTGCGGCTGCATCTGAAGTTGCCTCCCTCGCCTCAAAGAACGCTGCGGCTGCATCTGAAGGGGCAGCTCTTACATATAAGAACGCTGCGGCTGCATCTGCTGGTGAAGCATTGAACTCAAAGAACGCTGCGGCCACCTCTGCGAGTGAGGCTCTATCGTCGAAAAACGCTGCGGCCACCTCTGCGGGTGAAGCGGCGCTCAATGCCAGCACAGTCCTGTCCCACATTGCGTCCTATGGGGCAAACCCCGTTGGAACAATTGTGATGGCCCTCAAGGATGCGCTGCCTGGGCACCTTCTATTGAATGGGGCCACGTTCGATCGGACTGAGTACCCAGAGTTGTACGGGTATCTTGGCACCAATGTGCTACCCGACTGGCGCGGACGTTATCTGAAGGGAGCTGATGGGACTAACCTCGGCACGTTTGCAGCAGGGGCCATGCCGTCCCATACCCACACAACCCCAGATCACACCCACACAACCCCAGACCACACACATACAGGCGCAACGGAATCAGCAGGTGTCCACCAGCACGGAGGCTCCACGTCCGCTGGAGGCTCACACCAGCACGGTATCTACGCCAGTGGTAACAACACGTCATATGGACGTCAGGGTACAGGTAGTGGCCCAGGCGACTGGACAGCCAGTACTTCTTGGGCAGGCGATCACGCTCACAGCATTGTGACTTCCTGGGATGGCGCTCACACCCACGCGGTGACTATCTACTCGGGTGGTGGCGGTACTACTGGTTCTGCTGGTGCTGGTACTACTGGTTCTGCTGGTACTGGTAACAAAGTGGAAACTGACCGCATCCATGTGAACTTCTTCATTAAAGCTAAAGGACTCGCTCAGGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
097807808dc1b180e36fb000b002a2bb6296fb433e89a4f4e37570dd82d5a3cf
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7653
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50