Protein

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Genbank accession
YP_010113514.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MNKLSINQYINKKTGDSISATEWNAVFSQIQDKINEIIDHSGTTDKNTELYINGELHTENKIVLESAKQYVIKGVLYGELVINAELLTAPTDNTYITFDGVTIVSDTDCAIMYKTPEQNKGYKDLVITLTKDSQNFIVANKSADRVDNQPGAIYSMNNMVVQGEGYLALHNKGGHGLRATELKVAGPHIYADVIHDAVHAGKYLEIDNCVIYCENTHDVFGTGTSGKLYALDADIHVVNIDGVMLNCGTNGFYTNTVKANNELTVHNVTLLSAIDESNFEQIFGVAPTPTVTVFATEEDYNANNGQAVDVSADTISITSPYVKVSGFLQKPISYNPAVAVDLNVYLNGAYIKTTGNVPSINYIPSNGKVKVTASKDTINAIYNTFAEETTPELTESDGIKSENNIRIEAKNGSILYVTSAIGDGIDGGEVKITDTKGSVVVTNCGLRGIKGNAIVVGPNANIVKSVITPIADVTDEEGYYVNPEDLENYSDMLGIAVCKHNCKKGESVVSAGNAKNTGIADIYCRNGKATKGVFGTTNTELKGVLVCGSVAAVIGINFNNAQHIYYNRALTDNITKDCGITEAEYIAVPYEKTPITA
Physico‐chemical
properties
protein length:597 AA
molecular weight: 64239,27710 Da
isoelectric point:4,88005
aromaticity:0,07203
hydropathy:-0,15879

Domains

Domains [InterPro]
IPR025584
CBM
59–224
IPR025584
IPR025584
CBM
59–215
IPR025584
YP_010113514.1
1 597
Architecture
CBM
CBM 59-224 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010113514.1
1 597
Domain Start End Length (AA) Confidence
N-terminal 1 59 59 0,7336
Central domain 60 586 528 0,9856
C-terminal 587 597 10 0,3529
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-59
Central
60-586
C-terminal
587-597

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured phage cr273_1
[NCBI] 		2772095 Uroviricota > Caudoviricetes > Crassvirales > Oafivirinae > Buhlduvirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010113514.1 [NCBI]
Genbank nucleotide accession
NC_055904 [NCBI]
CDS location
range 21559 -> 23352
strand -
CDS
ATGAACAAATTATCTATTAATCAATACATCAATAAAAAGACCGGAGATAGTATTTCAGCAACAGAGTGGAATGCAGTTTTTTCACAGATCCAAGATAAAATAAACGAGATCATAGACCATTCCGGAACTACCGATAAAAATACTGAACTGTACATTAACGGCGAACTTCATACAGAGAATAAGATTGTATTAGAGAGTGCAAAACAGTATGTTATAAAAGGTGTACTGTATGGTGAGCTTGTTATAAATGCAGAGCTTCTTACAGCCCCAACAGATAACACATATATAACATTTGATGGTGTTACTATTGTAAGTGATACGGATTGTGCTATAATGTACAAAACTCCAGAACAAAACAAGGGCTACAAAGACTTAGTAATAACTCTTACAAAAGACAGCCAGAACTTCATTGTTGCTAATAAGAGTGCAGATAGAGTTGATAATCAGCCAGGAGCGATATATTCTATGAACAATATGGTTGTTCAAGGAGAAGGTTATCTTGCTCTACATAATAAGGGTGGTCACGGTTTACGTGCTACAGAGCTGAAGGTTGCTGGCCCACATATATACGCAGATGTAATTCATGATGCAGTGCATGCTGGAAAATACCTCGAGATCGACAACTGTGTTATTTACTGTGAAAATACACACGACGTATTTGGTACAGGAACATCTGGTAAGTTATATGCATTAGATGCAGACATACATGTAGTAAATATCGACGGTGTAATGCTTAATTGCGGTACGAATGGTTTCTATACAAATACTGTAAAAGCTAACAATGAACTTACTGTACATAATGTTACGTTATTGTCAGCAATAGACGAATCTAATTTTGAACAGATCTTTGGTGTAGCTCCAACTCCTACAGTAACTGTATTTGCTACAGAAGAAGACTATAATGCCAATAACGGGCAAGCTGTAGATGTGTCCGCAGACACAATCTCAATTACTTCTCCATATGTAAAAGTATCTGGTTTTTTACAAAAGCCTATTTCGTATAATCCAGCAGTAGCAGTTGACTTAAATGTATACCTTAATGGTGCATATATAAAAACAACTGGCAATGTGCCTAGCATTAATTATATTCCCTCTAATGGTAAAGTAAAGGTTACTGCATCTAAAGACACAATTAACGCGATATACAATACATTTGCGGAAGAAACAACTCCAGAATTGACTGAAAGTGACGGTATAAAGAGTGAGAACAACATTCGTATTGAAGCAAAGAACGGATCTATCTTGTATGTTACATCGGCTATAGGTGATGGTATAGATGGTGGTGAAGTAAAGATTACAGATACAAAGGGAAGTGTAGTAGTTACAAACTGCGGTCTTCGCGGTATAAAAGGAAATGCTATTGTTGTTGGTCCAAATGCAAACATAGTAAAGAGCGTTATAACACCGATAGCAGATGTAACTGACGAAGAGGGTTATTACGTAAACCCAGAGGATCTTGAGAACTATTCAGACATGTTGGGAATCGCCGTATGTAAACACAACTGTAAAAAGGGAGAGAGCGTAGTATCTGCAGGCAATGCAAAAAATACAGGTATTGCTGATATATACTGTAGAAATGGTAAAGCTACTAAGGGCGTATTTGGTACAACAAACACTGAACTGAAAGGCGTGCTTGTTTGTGGTAGTGTTGCTGCAGTTATTGGTATTAACTTTAATAATGCACAGCATATATATTATAATAGAGCGCTTACTGATAATATTACAAAAGACTGTGGTATAACAGAAGCAGAATACATTGCTGTACCATACGAAAAAACTCCTATAACAGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d665d21d1c4d7e1b0c4d25e1a43d72c263bc4e113b884cb182554a17c5629f20
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6626
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Taxonomic proposal: Crassvirales, a new order of highly abundant and diverse bacterial viruses Shkoporov,A.N., Stockdale,S.R., Guerin,E., Ross,R.P. and Hill,C. 2023-03-24 — GenBank