Protein

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Genbank accession
YP_004934228.1 [GenBank]
Protein name
minor capsid protein
RBP type
TF
Evidence RBPdetect
Probability 0,80
Protein sequence
MLRSITNTFLALLLFITLFLSLFPFNANAEIECQIGISSGSVNWSGELFGDKPYTCVRTCRYNLATVSLCFVNNATCHGEFISTGQNCFLENGQIDPSDGLRFGGNTVIADPSADPNKPWDPNEPSTMPNKVQNVLNQMPRDTSSGVDQAKALKSVAHIEGMGVIALDELVKKNSEILDVTKGFSSQISSMTSAINSMSNWSQHIEANTLISSQQSQLTTNTLANILNKLNESGGGSGGGSGLPDSQFNSFMTSMSTTRSMISSNANNIVSAVRDVREAVRPVEFGINAVNEKLQLVNENLAGLSEGLFYTMEDNTNKIVSAINANGGGSGGGDTDLSGLQSGIDSIKTGIDNLNGLLGGNGLDKPSVGSGVDFAQLPLYGDDALTSLNTQITDLQKEYSDKIKEFKKLFSFDISKLEGGQYKDHSLNFQFANGSANSFTSGVFPALVDNAGLISSVILFLAVFAGIRTIMGERE
Physico‐chemical
properties
protein length:475 AA
molecular weight: 50625,09710 Da
isoelectric point:4,69993
aromaticity:0,07158
hydropathy:-0,12105

Domains

Domains [InterPro]
DC_2229
STR
1–475
DC_2229
Coil
Unmapped
385–405
Coil
YP_004934228.1
1 475
Architecture
STR
STR 1-475
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VCY
[NCBI] 		1105327 Viruses > Monodnaviria > Loebvirae > Hofneiviricota > Faserviricetes
Host Vibrio cholerae
[NCBI] 		666 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004934228.1 [NCBI]
Genbank nucleotide accession
NC_016162 [NCBI]
CDS location
range 2437 -> 3864
strand +
CDS
ATGCTGCGTTCAATCACTAATACCTTTCTTGCTTTACTTTTGTTTATTACCCTTTTTTTATCTCTTTTTCCTTTCAACGCTAATGCTGAAATTGAGTGCCAGATTGGCATCTCTTCCGGTTCTGTCAATTGGTCGGGTGAATTGTTTGGTGATAAGCCTTACACTTGCGTTCGCACTTGTCGTTATAACTTAGCTACTGTCTCCCTTTGCTTTGTTAACAATGCTACTTGTCACGGTGAATTTATTTCAACTGGACAAAATTGTTTTTTGGAAAACGGCCAAATTGACCCTAGCGACGGTTTACGCTTTGGTGGTAATACTGTTATTGCAGACCCAAGCGCTGACCCTAACAAGCCTTGGGATCCAAACGAACCCTCTACCATGCCTAATAAAGTTCAGAACGTTCTGAACCAAATGCCTAGAGACACCTCCAGCGGTGTTGACCAAGCCAAAGCTCTAAAAAGTGTTGCTCATATAGAGGGCATGGGTGTTATTGCACTTGATGAGCTTGTAAAGAAAAATTCTGAAATACTCGATGTAACCAAGGGCTTTTCTAGTCAGATTTCCTCTATGACTAGCGCCATTAATTCTATGAGTAATTGGTCACAACATATTGAGGCCAATACCCTAATCTCTTCACAGCAATCCCAATTAACCACTAATACTCTTGCCAACATTCTTAATAAATTAAATGAGTCTGGCGGCGGCTCTGGTGGCGGCTCTGGTCTTCCTGATTCGCAATTCAATTCTTTTATGACTTCCATGTCTACGACTCGTAGCATGATTAGTTCTAACGCTAATAACATCGTTAGCGCTGTTCGAGACGTTCGCGAGGCGGTTCGACCTGTTGAGTTTGGTATTAATGCCGTAAATGAAAAGCTTCAACTTGTTAACGAAAACCTAGCAGGTTTAAGTGAGGGCTTGTTTTATACCATGGAAGACAACACGAACAAGATTGTCTCTGCTATTAACGCCAATGGTGGCGGCTCTGGTGGTGGTGACACTGATTTATCTGGTCTCCAATCCGGTATTGATTCTATTAAGACGGGTATTGATAACTTAAATGGTCTCTTGGGTGGTAATGGCTTAGATAAGCCTTCTGTTGGTTCCGGTGTTGATTTTGCTCAGCTTCCTCTCTATGGTGATGACGCTTTAACTTCTCTAAATACTCAAATTACAGATTTACAGAAAGAATATTCAGATAAAATTAAGGAATTTAAAAAGCTCTTTTCATTTGATATTTCTAAGCTTGAAGGGGGTCAATATAAAGACCACTCCCTAAATTTTCAATTTGCTAATGGTTCTGCTAATTCTTTTACATCAGGTGTCTTTCCTGCTCTTGTCGATAATGCCGGATTAATTTCATCTGTTATTTTATTCTTGGCGGTTTTTGCAGGGATTAGAACGATTATGGGGGAGCGTGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b1587c9283f7a63a4d96d06f60ed395a155faec6dd2a9dc5afc19057094a7203
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5530
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50