Protein

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Genbank accession
XPO94832.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MTPNNNLSVLPFYESPQYQDYKKSYAYGDVYPLFTPINKLLPFQIIRPTRSNNIVSVRLYDYKFTRILADITTPMLETGLQIVRFANYGYDVIVYPGLLPLSLDLLEGRYMIAISDGVQTFYSDVFTWISGGMDGYLCIEWSDAANMEVDGGQIVYEGVQFKNRVYVCAELGKPEYKFEEEGEERDGYFFPEKQISEKTFRFIFLAPEYLCDVMRLIRMSDFVTVYSKGRKYDCDTFLITPKWQTQGNLASVECEFECATVVKKIGRGVIPTTGGDYNNDYNNDFNN
Physico‐chemical
properties
protein length:287 AA
molecular weight: 33112,21830 Da
isoelectric point:4,66338
aromaticity:0,15331
hydropathy:-0,24808

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPO94832.1
1 287
Domain Start End Length (AA) Confidence
N-terminal 1 12 12 0,8733
Central domain 13 228 217 0,1588
C-terminal 229 287 58 0,4788
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-12
Central
13-228
C-terminal
229-287

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteroides phage BKO1-3
[NCBI] 		3385215 Viruses > unclassified bacterial viruses >
Host Bacteroides ovatus
[NCBI] 		28116 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPO94832.1 [NCBI]
Genbank nucleotide accession
PQ571267.1 [NCBI]
CDS location
range 19657 -> 20520
strand -
CDS
ATGACACCGAATAACAATTTGTCTGTATTGCCGTTTTATGAAAGTCCGCAATATCAAGATTATAAAAAATCGTATGCGTATGGCGACGTTTACCCGTTGTTTACGCCTATCAATAAACTATTGCCGTTTCAAATCATACGCCCGACCCGTTCAAATAACATTGTATCGGTTCGGTTGTATGATTATAAATTTACCCGGATATTGGCGGACATAACAACGCCGATGTTGGAAACCGGATTGCAGATTGTCCGGTTTGCTAATTACGGTTATGATGTTATTGTTTATCCCGGATTGTTGCCGTTATCTTTGGATTTATTGGAGGGTCGATATATGATTGCTATAAGTGACGGTGTACAAACGTTTTATTCGGACGTATTTACATGGATTTCCGGGGGAATGGATGGTTATTTGTGCATTGAATGGAGCGACGCCGCCAATATGGAGGTTGACGGCGGACAAATCGTTTACGAGGGCGTACAATTCAAAAACCGGGTTTACGTGTGTGCCGAGTTAGGAAAACCGGAATATAAGTTTGAGGAAGAGGGCGAAGAACGGGACGGGTATTTTTTCCCGGAAAAACAAATATCAGAAAAAACGTTTCGGTTTATCTTTTTAGCCCCCGAATACCTTTGCGACGTAATGCGGTTAATCCGTATGAGTGACTTTGTTACGGTTTATAGTAAAGGCAGGAAATACGATTGCGACACGTTTTTAATTACCCCTAAATGGCAAACGCAGGGTAATTTGGCGTCGGTCGAATGCGAGTTTGAATGTGCAACGGTCGTTAAGAAAATCGGACGGGGGGTTATCCCGACGACCGGAGGCGATTATAACAATGATTATAACAATGATTTTAATAATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3edb6a84ecc90229451a4bc8fcbc253ffaca154633318b955419b033252ac8f7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5885
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50