Protein

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Genbank accession
QCW22986.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTVRISGTNTTAAPGFQGGDSDTGIRPGTNEIEFVTGGSVAATFNSSGNLVFPDTQGIDFSAASGSAAGSTSAILDDYEEGTFTPSFLNGTFTYGSSLSGLYTKIGNQVTAHFQIPWTAKSGSGTLGVVLPFVSGGDLTNRYCGTFGYVSGVDTMSNRQIVATVTGTGNNFVVYVLGDNASPDASLVENMSSTGELQATITFIV
Physico‐chemical
properties
protein length:204 AA
molecular weight: 20869,62820 Da
isoelectric point:4,10721
aromaticity:0,09804
hydropathy:0,06373

Domains

Domains [InterPro]
DC_2088
RBD
1–199
DC_2088
QCW22986.1
1 204
Architecture
RBD
RBD 1-199 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-B05
[NCBI] 		2484637 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QCW22986.1 [NCBI]
Genbank nucleotide accession
MK799832.1 [NCBI]
CDS location
range 144920 -> 145534
strand +
CDS
ATGACTGTAAGAATTAGCGGAACAAATACTACAGCAGCACCTGGTTTTCAGGGTGGTGATTCAGACACAGGTATCAGACCTGGCACTAATGAAATTGAATTTGTAACTGGTGGTAGTGTAGCTGCAACGTTTAATAGTAGTGGTAATTTAGTATTTCCAGATACTCAAGGTATTGACTTCTCTGCTGCTTCAGGGTCTGCTGCTGGTAGTACTTCTGCAATTCTTGATGATTATGAGGAGGGCACTTTTACACCATCATTTTTAAACGGCACTTTCACATACGGATCTAGTTTATCAGGTCTATACACAAAAATTGGTAATCAAGTTACTGCACACTTTCAGATTCCTTGGACTGCTAAATCAGGTAGTGGAACGTTGGGAGTTGTATTACCTTTTGTTTCAGGAGGTGATCTCACTAATAGATATTGTGGTACTTTTGGATATGTAAGTGGTGTAGACACTATGAGTAACCGCCAAATAGTTGCCACAGTCACCGGCACTGGTAATAATTTTGTTGTATATGTTCTCGGTGACAACGCTTCCCCTGATGCTTCACTTGTCGAAAATATGTCGTCAACGGGGGAGCTTCAAGCAACCATCACTTTTATAGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8da0569134982e7726571ae9e54d3c76036d9d29647d20bb1eace350317539a4
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8659
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-B05 from the Bohai Sea, China Jiang,T. 2020-10 — GenBank