Protein

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Genbank accession
QBZ68983.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,81
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MANKISTVRTYPLNGAVDFTITFEYLARKFVKVTLIGKDRKELVLNQDYRFTTKTQITTSRAWTDADGYQMIEIRRFTSASDRLVDFADGSILRAYDLNISQIQTLHVAEEARDLTADTIGVNNDGHLDARGRRIVNVADPVGEYDALNLRTVKQWNDGAYQSYVKARTEADRAKSEADRAQQEATKANNFAVHSEQYGIRSESAAVSSEAARDRAISAESNAASSASDALTSEGQAAAHNEAARQSRIKAEEARDRAIVEADKLESMNDFAGALDSVDGNHVAFKGNIATPGNIVGGGITSTGAGQFDKGVSIGDLLVVGGDIQAQKDILVDGIVVANGGLRQQSNGNAYNSMWRLHIKNSPMHIGLQGLHFAWNEQSSGEANFICNKGLGDGGFVFRTVNSGNTAELGRVTFTGNGEVHARHFQGENGARIEAGNNIIGQIIYSGMGRCHFNYEGNLRGGLWDNYGGDLYNFLHNKYQFAKPPGGVQLYTGRGGDYIEGTVDGSAVGFRWFSSDRRLKEDLKVVRDADDMLNIIRSYIPVSYKYKDKTWTDNHGRSVKTVGKRSRAGFITQDLIRLWPEAVDVMSDGMQSPDPNQIIGGLMLLVKNLDARIQELEKDKE
Physico‐chemical
properties
protein length:621 AA
molecular weight: 68074,82840 Da
isoelectric point:5,97431
aromaticity:0,08052
hydropathy:-0,48180

Domains

Domains [InterPro]
IPR005604
ATT
1–130
IPR005604 Coil IPR030392
DC_0264
STR
1–606
DC_0264
IPR030392
CHP
515–583
IPR030392 Coil
QBZ68983.1
1 621
Architecture
ATT
STR
CHP
ATT 1-130 | STR 131-606 | CHP 607-620 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBZ68983.1
1 621
Domain Start End Length (AA) Confidence
N-terminal 1 281 281 0,9355
Central domain 282 480 200 0,3928
C-terminal 481 621 140 0,9780
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-281
Central
282-480
C-terminal
481-621

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage VB_Ship_A7
[NCBI] 		2562138 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Berlinvirus
Host Shigella flexneri
[NCBI] 		623 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
59b8dff9b9306ea1811da61b9357f769e25f90c1b25cd35572011877031b47ac
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6303
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50