Protein

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Genbank accession
YP_012319346.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect2
Probability 0,85
Protein sequence
MVVKQSGKIDLGSVIGPQGPRGEQGPAGATGPAGPIGPAGPKGEKGEQGLAGATGERGPQGPAGPTGERGPAGPAGATGPAGPKGDKGDTPKFKFTIEGGHLYVEEVE
Physico‐chemical
properties
protein length:108 AA
molecular weight: 10347,34990 Da
isoelectric point:5,83426
aromaticity:0,02778
hydropathy:-0,67037

Domains

Domains [InterPro]
DC_0620
STR
4–104
DC_0620
IPR050938
Unmapped
12–90
IPR050938
IPR008160
STR
34–89
IPR008160
YP_012319346.1
1 108
Architecture
STR
STR 4-104 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage DCp1
[NCBI] 		2981543 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Clostridium perfringens
[NCBI] 		1502 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Eubacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_012319346.1 [NCBI]
Genbank nucleotide accession
NC_108347 [NCBI]
CDS location
range 1536 -> 1862
strand +
CDS
ATGGTTGTAAAACAAAGTGGAAAGATTGATTTAGGGAGTGTTATAGGTCCTCAAGGTCCTAGAGGAGAACAAGGTCCAGCGGGTGCAACTGGTCCAGCGGGTCCAATAGGTCCAGCGGGTCCAAAAGGAGAAAAAGGAGAACAAGGTCTAGCGGGTGCAACTGGTGAAAGAGGTCCTCAAGGTCCAGCGGGTCCAACTGGTGAAAGAGGTCCAGCGGGTCCAGCGGGTGCAACTGGTCCAGCGGGTCCAAAAGGAGATAAAGGCGACACACCAAAATTTAAATTTACTATTGAAGGTGGTCATCTTTATGTAGAGGAAGTGGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
40496f8ecd14e2a74cca727808a79a34a380ea3366739680ea49df0b63cd6ec6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8766
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence analysis of a novel Clostridium perfringens phage DCp1 Tang,Z. 2023-02-20 — GenBank