Protein

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Genbank accession
YP_224167.1 [GenBank]
Protein name
central tail fiber J
RBP type
TSP
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSSGGGKASTPKLLDDNLKSKQFYRVLDLISEGPIFGPVDQEHLSSFKLNKTPVTDATGSVSVNGVSVAWRPGAETQSPINGFSAIEATTIMNTEVTYDTPLVRTITDQDVTRVRFNVGVTGLVEQDTKGNQNNTTVTMVLESRTGASGWVIEKTVTITGKISGEYLEAHLIDAPNIKPFDIRVRRITPDSSSDLLSNGTIWNSYSEITDDNLSYPFSAIAGAVIDRDQYTDTPSRTYHLRGLIVDVPDNYDPIARTYSGLWTGGFKKAWTNNPAWLFRELARNTRFGLAKRAGYIDIDDGALYVLSQYCDQPVNDGYGGQEPRMTLNAYITEQVSARDILDKIASMFRGIALWDGMRLSVMLDAPQDPIATITNANVVDGEFKRSSVKRSEKYNAVVVSWTDPDNGWEQVKEYVSDDEMIARGNYNETTIEAFGCTSRGQAWRAGKWLLETAKRESSRLSFQMARDAIHFTPGDIVEIMDNNYAGARLGGRIMSHAGNRITVDAVDSSLISDGDTMSIMGSNGKFVKYEIGSISGNVVTLKTTPAWVSDGTVFAISTSNVSTRLFRILSIAETDNNSVYSITASQHDPNKQAIVDEGAVFEIPNDTLNGYRVPNVENLRIINTDSETVQVTATWETATTTKKLVFELYVYTDDGKVIAQYETDQFRYEFFGLNAGGYTLGVRGRNENGMKGAETQISMVIGAPPAPSSVIWTPGLFSADLVPVMRITATTDTSFEFWYSGQNQIVNPDDIEDQTQFLGRSNQWTLHGLQADKTYYVYVRTKNAFGVSEFVEASGQASSDIPGMIELIDEQIRESDAFKNVQQGVNTNLDGIMSNALANHGTVEHQYQQYGEVRADILVVKTTVATAEQGLADLSTYVQAQIGPEGELTSAVNQKMTAEVNSDGTAKASYTLNMGIVRNGVKYNTGFGMSIEPDGAGSYKSTALVAADQFGVYSGSDPGNYKAAFLVSNGQVFINDAFINYASITLAKVGSWYSANYAEGQTGTIMKADGTFEVNGAVSGQGGTKLTNTNYSVKDGNGVLRVQIGQITGVF
Physico‐chemical
properties
protein length:1051 AA
molecular weight: 114576,14840 Da
isoelectric point:4,78473
aromaticity:0,09134
hydropathy:-0,29553

Domains

Domains [InterPro]
IPR053171
Unmapped
1–876
IPR053171 IPR015406
DC_0014
STR
1–1051
DC_0014
IPR055385
ATT
87–211
IPR055385 IPR032876 IPR055383 IPR057587
IPR003961
STR
613–691
IPR003961 IPR003961
IPR036116
STR
617–792
IPR036116
YP_224167.1
1 1051
Architecture
STR
ATT
STR
ATT
STR
ATT
STR
STR 1-86 | ATT 87-211 | STR 212-331 | ATT 332-494 | STR 495-705 | ATT 706-809 | STR 810-1051
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_224167.1
1 1051
Domain Start End Length (AA) Confidence
N-terminal 1 528 528 0,7684
Central domain 529 989 462 0,0739
C-terminal 990 1051 61 0,7382
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-528
Central
529-989
C-terminal
990-1051

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacteria phage ES18
[NCBI] 		101570 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_224167.1 [NCBI]
Genbank nucleotide accession
NC_006949 [NCBI]
CDS location
range 20147 -> 23302
strand +
CDS
ATGTCTTCAGGCGGCGGCAAAGCATCAACCCCCAAACTACTCGACGATAATCTCAAATCAAAGCAATTTTACCGGGTACTGGATCTAATTTCGGAAGGTCCAATTTTCGGGCCCGTTGACCAGGAACACCTGTCGTCTTTCAAGCTCAACAAGACCCCGGTAACAGACGCGACAGGCAGCGTAAGCGTAAATGGCGTAAGCGTAGCCTGGCGCCCGGGGGCTGAAACGCAATCACCCATTAACGGCTTCTCTGCTATTGAAGCAACAACTATCATGAACACCGAAGTAACCTATGACACGCCGCTGGTACGCACTATAACCGATCAGGACGTTACCCGGGTGAGGTTCAACGTTGGTGTGACCGGTCTGGTTGAGCAGGACACTAAAGGAAATCAGAACAACACCACCGTCACTATGGTGCTGGAGAGTAGAACTGGTGCTTCAGGCTGGGTTATTGAAAAGACCGTGACTATCACCGGAAAGATATCAGGCGAGTATCTTGAGGCCCATCTGATTGATGCTCCGAATATCAAGCCGTTTGATATTCGAGTTCGCCGCATTACACCCGACAGCAGCAGCGATTTGCTGTCCAACGGTACTATCTGGAATAGTTACAGTGAAATCACCGACGACAACCTTAGCTATCCGTTCTCCGCTATTGCGGGTGCAGTTATTGACCGTGACCAGTACACCGACACCCCTAGTCGCACATACCATCTTCGCGGCCTGATTGTGGACGTTCCTGACAACTACGATCCGATTGCCAGAACTTACTCAGGGCTATGGACTGGCGGATTCAAAAAAGCGTGGACTAACAACCCGGCGTGGCTGTTCCGTGAACTGGCGAGGAATACCCGTTTTGGCCTGGCGAAACGTGCCGGTTATATCGATATAGATGACGGTGCGCTGTACGTCCTCTCACAGTATTGCGATCAGCCTGTTAACGATGGCTACGGCGGGCAGGAACCAAGGATGACGCTGAATGCCTATATTACCGAGCAGGTGAGTGCGCGTGACATTCTCGACAAGATAGCGAGCATGTTTCGCGGTATAGCACTGTGGGACGGGATGCGACTGTCTGTCATGCTGGATGCGCCACAGGACCCGATTGCGACAATCACGAATGCTAACGTGGTTGATGGCGAGTTCAAGCGTAGCTCCGTGAAGCGTTCAGAGAAATACAATGCCGTTGTTGTGTCATGGACTGATCCGGATAATGGTTGGGAGCAGGTAAAAGAATACGTTTCCGACGATGAGATGATCGCTCGCGGAAACTACAACGAAACAACAATTGAAGCATTCGGTTGCACGTCTCGCGGTCAGGCATGGCGCGCTGGGAAATGGCTTCTTGAAACGGCGAAACGGGAAAGCAGCAGACTGTCTTTCCAGATGGCGCGCGATGCTATCCACTTCACGCCGGGTGATATCGTTGAAATCATGGATAACAACTATGCTGGTGCGCGTCTTGGTGGCCGCATTATGTCGCATGCAGGTAACAGAATTACCGTGGATGCGGTTGATTCATCCCTGATATCAGACGGCGACACCATGTCAATCATGGGTAGCAACGGGAAGTTCGTTAAATACGAGATTGGCAGCATTTCCGGCAACGTGGTGACGCTGAAAACGACTCCAGCATGGGTTAGTGACGGTACTGTATTTGCCATCTCTACCAGTAACGTTTCTACCAGACTATTCCGCATCCTTAGCATTGCAGAGACCGATAACAACTCGGTCTACAGCATCACTGCATCACAACATGACCCGAACAAACAGGCCATTGTTGATGAAGGTGCCGTGTTTGAAATTCCCAACGATACGTTGAACGGTTACCGAGTCCCGAATGTGGAGAACCTGCGCATCATCAACACCGACTCTGAGACTGTCCAGGTCACTGCTACATGGGAGACAGCAACTACCACTAAAAAACTGGTGTTTGAGTTATACGTATATACCGACGACGGCAAAGTGATCGCTCAGTACGAAACAGATCAGTTCCGCTACGAGTTCTTTGGTCTGAACGCCGGTGGATACACGCTTGGCGTTCGCGGTCGCAATGAAAACGGAATGAAAGGCGCTGAGACGCAAATTAGTATGGTCATCGGTGCGCCACCTGCACCATCCAGTGTTATCTGGACGCCAGGCTTGTTCTCTGCTGACCTGGTCCCCGTCATGCGCATTACGGCAACGACAGACACATCGTTTGAGTTCTGGTACTCCGGGCAGAACCAGATTGTCAATCCTGACGATATTGAAGACCAGACTCAGTTCCTCGGGCGCTCTAACCAGTGGACGCTTCATGGTCTACAGGCTGATAAGACGTATTACGTTTATGTCCGCACCAAAAATGCTTTCGGGGTATCGGAGTTCGTTGAGGCATCAGGTCAGGCGTCATCAGATATTCCTGGAATGATAGAACTCATTGATGAGCAGATCCGCGAATCAGATGCGTTTAAAAATGTTCAGCAGGGTGTCAACACCAACCTGGACGGTATCATGTCGAACGCGCTGGCGAACCACGGAACCGTTGAGCACCAGTATCAGCAATATGGGGAGGTTCGCGCCGACATCCTTGTTGTGAAAACAACTGTCGCTACTGCCGAGCAGGGGCTCGCCGATCTTTCCACTTACGTACAGGCACAAATAGGCCCTGAAGGAGAGTTAACCTCAGCCGTAAATCAGAAAATGACCGCTGAGGTAAATAGTGATGGGACTGCAAAAGCCTCTTACACACTCAATATGGGGATTGTCAGGAACGGTGTGAAATATAACACCGGATTCGGCATGTCTATCGAGCCAGACGGAGCAGGTAGTTATAAATCTACTGCTCTCGTTGCCGCCGACCAGTTCGGTGTTTATAGCGGTAGCGATCCGGGTAATTACAAGGCTGCATTTCTGGTATCTAACGGGCAGGTATTCATCAACGATGCTTTTATCAATTATGCGTCCATAACCCTTGCCAAGGTTGGCTCATGGTATTCAGCCAATTACGCAGAGGGACAGACGGGGACGATTATGAAAGCAGACGGTACGTTTGAGGTTAACGGGGCTGTATCTGGGCAGGGTGGCACAAAATTGACGAATACCAATTACAGCGTTAAGGATGGAAACGGTGTTCTTCGTGTGCAGATAGGTCAAATAACGGGGGTATTTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ff6b0121e9c429d2c5207eb4e212e04cd16de4d999c5f971738caf6d494b843a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2801
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50