Protein

View in Explore
Genbank accession
AUS01937.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,83
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MPVVIPYIAIALSVASAIYAASLDLSPTADPTDTGALINKSGTRATRDVVYGRCLTGATPLWSNVNNSSTNELMQVFSTGIAVTAIHQLYIDNVKVLSEETYRETTNTSSLILSGSSQLVNGFEKQCTIQLRTGFPIGAPMNGDLPIGTPMQLAIDNSDGEWTDKMRGDYTSMVAIKSKRIIDDEAIRIMSESYAVNLEVSGVPVFDPRVSSDPATKSYSRNPALCALDYITNIYYGMGIGFDKVDTNSFATAANHCDANKFYIDGQLNQGESFASNLENICSAAQLHLFIENGKLVCRVETVAMSSWSFNENNILKGTLRVTEQTSASYANVISVNYKNSELDDKEDVFTVPANIYPTQSDPSYPTKPQVDGYIATTELNMPMTRYVGANSNDIYSPMKKFANIELRKQDFQKEIEFDIDREEYNISVFDVIEVSDDAIGWDKKQFRITGFATRISETDMNIVTLKCKEYSSTVYDGSMDGTPPSTKPLPPVEVSQPTNLTFTLQDLIISGSATLSWSRTWFESNVQYDVEYKRSSSSTWTRVGRTSTNEWKFPNLYPDTYDFRVATWSNLYGSSNYTQLTGVVISQLGTFPSVTGLKCDTTTQDFKWTWDDMLDSSVILPPDPRPDAPTNPVVRDYFSHYQVDILDGTTLIDSYQATTNLYDYTYATNRANGILRTIRANVYIVAKDGTRSQLGSADLTASNPQQSAPTGIVDSTELSNTIITWDQPSDFSDYRATRFYQSKTKGFVPSQSNFLKEQVGTLFSHIWSDTDDHYIRFAHVDVFGNDSESFSHEILVTPSTIDGLFPIDPDFAEIRDPQGAAGKEQVFKAADGEYVSGIGIYADEPTKSTKILMAAEQVLMGVGGRPFYKPTTSYVVGDKVLYKRTPEITALYECKTATTGNLPTNTTYWKVLQSNADQAVFAVNESGKVLIRNAVIEDLTSDNIKARSIVADDIAANTITANEIYANTITGGEINSETTIIAGIGATSAGMNGDDSVGSSYKNYRFWSGADLPASAPYRVDRNGKLTATGADINGKLTATSGTMDNVTINQNCTVLGTISATQIVGDIVSGITKTNTTQSVNVTSYENETWNRTPSFGSVTIKNSRAWARTLVITLHIEINENSGAAYGAGRMRLFVAGTSGGSNYYSRQYNGDEKEDTRSRVYKLGADVTMVIPIPANTKPTFTFYTEGARKQGRSYNFDVSISAPQTNNVWCAYLLSNGGDLS
Physico‐chemical
properties
protein length:1226 AA
molecular weight: 134564,12080 Da
isoelectric point:4,77825
aromaticity:0,09706
hydropathy:-0,32382

Domains

Domains [InterPro]
DC_0187
STR
1–629
DC_0187 DC_1241 DC_1438
IPR013783
STR
491–588
IPR013783 DC_1267
IPR003961
STR
496–580
IPR003961
IPR036116
STR
496–582
IPR036116
IPR003961
STR
497–590
IPR003961
AUS01937.1
1 1226
Architecture
STR
ATT
RBD
STR 1-599 | ATT 600-803 | RBD 1015-1225 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUS01937.1
1 1226
Domain Start End Length (AA) Confidence
N-terminal 1 82 82 0,8773
Central domain 83 281 200 0,1200
C-terminal 282 1226 944 0,2323
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-82
Central
83-281
C-terminal
282-1226

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 2.058.O._10N.286.46.B8
[NCBI] 		1881377 No lineage information
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUS01937.1 [NCBI]
Genbank nucleotide accession
MG592662.1 [NCBI]
CDS location
range 14654 -> 18334
strand +
CDS
ATGCCAGTAGTAATTCCATATATTGCTATAGCTTTATCGGTGGCTAGTGCAATATACGCAGCATCATTAGATCTGTCCCCCACAGCAGACCCAACCGATACGGGTGCGTTAATAAACAAATCCGGTACACGGGCAACGAGAGATGTGGTTTATGGTAGATGTTTAACCGGAGCGACCCCATTGTGGTCTAATGTAAACAATTCGAGTACCAACGAGCTTATGCAAGTATTCTCTACTGGTATAGCAGTAACCGCAATACATCAATTATATATTGATAATGTAAAGGTTCTATCCGAGGAAACATACAGAGAAACAACTAATACATCATCATTAATCTTATCGGGTTCTTCGCAATTAGTGAACGGATTTGAAAAACAGTGTACGATCCAATTACGTACAGGATTCCCCATTGGGGCACCAATGAATGGAGATCTACCCATTGGTACGCCAATGCAGTTGGCTATCGATAATTCTGATGGTGAATGGACCGATAAAATGCGCGGTGATTACACATCAATGGTAGCAATCAAATCGAAACGTATAATCGACGATGAAGCAATCCGAATAATGAGTGAGAGTTATGCAGTCAATTTAGAAGTGTCTGGTGTTCCTGTATTTGACCCAAGGGTTAGTAGCGACCCAGCAACAAAATCATATAGTAGAAACCCAGCATTATGCGCTTTGGATTACATCACTAACATATACTATGGTATGGGTATCGGATTTGACAAAGTAGATACAAATAGTTTTGCCACCGCAGCAAACCATTGCGATGCCAACAAATTCTATATCGACGGACAACTAAATCAGGGAGAATCATTCGCATCAAATCTAGAAAACATATGTAGTGCTGCACAATTGCATTTATTTATAGAAAACGGTAAATTGGTGTGTAGAGTTGAAACTGTTGCTATGTCTAGCTGGTCATTTAACGAAAATAATATACTAAAGGGCACATTACGAGTCACTGAACAAACATCGGCATCATATGCCAACGTTATATCAGTTAACTATAAAAATTCGGAGTTGGATGATAAAGAAGATGTGTTTACTGTACCAGCAAACATATACCCAACACAAAGTGATCCATCTTACCCAACAAAACCTCAAGTTGATGGTTATATAGCAACAACCGAACTAAATATGCCTATGACTAGATATGTTGGTGCTAATTCTAACGACATATATTCACCAATGAAGAAGTTTGCCAATATTGAGTTACGTAAGCAAGACTTCCAGAAGGAAATTGAATTTGATATAGATCGTGAAGAATATAATATATCGGTATTTGATGTAATTGAAGTGTCTGATGATGCGATTGGTTGGGATAAGAAGCAATTTCGTATAACTGGGTTCGCAACAAGAATATCAGAAACTGACATGAATATAGTTACACTGAAATGCAAAGAATATAGTAGTACAGTATATGATGGTTCTATGGATGGCACACCACCTTCAACTAAACCATTACCACCAGTTGAAGTATCACAACCAACTAACCTAACATTCACTCTACAAGATTTGATTATATCTGGTAGTGCAACTCTATCTTGGAGCAGAACTTGGTTCGAATCTAATGTACAATATGATGTCGAATATAAACGTTCAAGTTCATCTACTTGGACTAGGGTTGGTAGAACATCAACAAACGAGTGGAAATTCCCGAACCTATACCCAGACACTTACGATTTCCGTGTAGCAACTTGGTCTAATTTATACGGTTCGTCAAACTACACACAACTAACTGGGGTAGTGATTAGTCAGTTAGGTACTTTTCCATCAGTGACTGGTCTTAAATGTGACACAACAACGCAAGACTTTAAATGGACTTGGGATGATATGTTAGACTCATCGGTGATTTTGCCACCAGACCCTAGACCTGATGCACCAACAAATCCAGTAGTGAGAGATTACTTCAGTCATTACCAAGTTGATATATTAGACGGAACCACGTTAATCGATTCATACCAAGCTACTACCAACTTATACGACTATACATACGCCACAAACCGAGCTAATGGTATACTGCGTACAATTAGAGCCAATGTGTATATCGTTGCTAAGGATGGCACTAGGAGCCAATTAGGTAGTGCAGATTTGACCGCATCGAACCCACAACAATCTGCGCCAACTGGTATCGTAGACTCAACCGAACTAAGTAACACGATAATCACTTGGGATCAACCTAGTGATTTTTCTGACTATAGAGCAACTAGATTTTACCAAAGTAAAACTAAGGGTTTTGTACCAAGTCAATCGAACTTCCTTAAGGAACAAGTGGGCACACTGTTCAGTCATATATGGTCAGATACAGATGACCATTATATTAGGTTCGCTCATGTTGATGTATTTGGTAATGATTCAGAATCATTTTCTCATGAAATATTAGTAACGCCATCCACAATAGATGGATTATTTCCGATAGACCCTGATTTCGCTGAAATACGCGACCCGCAGGGAGCTGCTGGTAAAGAGCAGGTGTTTAAGGCCGCTGATGGTGAATATGTCTCTGGTATAGGTATATACGCAGACGAACCAACAAAAAGCACTAAAATATTGATGGCAGCGGAACAGGTTCTTATGGGTGTCGGAGGTAGACCATTCTACAAACCAACAACCTCATATGTCGTTGGTGATAAGGTACTATATAAACGGACGCCAGAAATCACAGCGTTGTACGAATGTAAAACCGCAACTACTGGTAACTTACCAACGAATACTACATATTGGAAAGTGCTTCAATCGAATGCAGACCAAGCAGTATTTGCTGTTAACGAATCTGGTAAGGTTCTGATCCGTAATGCTGTGATAGAAGACTTAACATCTGATAACATAAAGGCTAGATCTATTGTTGCTGATGATATAGCAGCAAATACAATAACAGCAAACGAAATATACGCAAACACCATAACAGGTGGAGAAATAAATTCAGAAACTACTATAATTGCTGGTATTGGTGCGACTAGCGCGGGAATGAACGGGGATGATAGTGTTGGCTCATCATACAAAAATTATCGATTTTGGTCTGGTGCTGATCTACCTGCTAGTGCCCCGTATAGAGTCGATAGAAATGGTAAATTAACTGCTACTGGTGCCGATATTAATGGTAAATTGACTGCTACTAGCGGCACGATGGATAACGTAACGATAAACCAAAACTGTACTGTGTTAGGGACAATATCAGCAACGCAGATTGTTGGTGATATTGTATCAGGCATAACAAAAACAAATACCACCCAATCAGTAAATGTGACGAGCTACGAAAATGAAACTTGGAATAGAACCCCATCGTTTGGTAGCGTGACCATAAAAAATTCTAGAGCATGGGCTAGAACTTTGGTTATAACCTTACACATAGAAATTAATGAGAATTCCGGTGCAGCTTATGGTGCAGGTCGTATGCGTTTATTTGTTGCTGGGACTTCTGGTGGTTCTAATTATTATTCTAGACAATATAATGGAGATGAAAAGGAAGACACTAGATCTAGAGTGTACAAATTGGGTGCTGATGTAACTATGGTTATACCAATACCAGCAAACACAAAACCAACATTCACATTCTATACAGAAGGTGCACGAAAACAAGGCAGAAGTTACAATTTTGATGTTTCTATTAGCGCACCACAAACAAATAATGTGTGGTGTGCATACCTATTATCTAATGGTGGTGACCTGAGTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
522ed814598ded39919933faba0ea34ca6b70579f026df4585f0e539a44e5165
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6957
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank