Protein

View in Explore
Genbank accession
YP_009812356.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MATTIKTVMTYPLDGSTTDFNIPFEYLARKFVRVTLIGVDRKELTLNQDYRFATKTTISTTRALGPADGYNLIEIRRYTSATERLVDFTDGSILRAYDLNISQVQTLHVAEEARDLTADTIGVNNDGDLDARGRRIVNVADAKDPGDAINLGQVQKWNDSALNSANRARAEADRATVRASEAATSAGNSASSASLSRDWAIKESPVEGTFKSSRSYAIDSMAYRDASKSSADASAASAGAAKTSEINANNSKIAAKTSETNAKTSENNAKASEERAIEEANKLENMNDLVGAIDKVDGANVYWKGNINANGRLFLTTNGFDCGQYQQFFGGVTYRYSVMEWGDKDGWHLYSERKTEGGRPTLNVNGDVSVGFDIRTGANQFANHMFVHDRVQYWPGAGMFVNQLSVPEAPFIKQGRYEAPSGNSLYAPIVKGIIRTAGHGYDTALSFGTLTQGNGSFASAGIHAIGDNGTSGFWEFNPNNRSFRSQGDGFFGNTTVYQDGNIGGPTWGGDLAHWLRVNTVNHIAMGGVNQSIVWNSYGVSDGGGKVVTGVVNSNADGAIDYCQWRVMQYVRNDGQCFNIY
Physico‐chemical
properties
protein length:580 AA
molecular weight: 62859,44560 Da
isoelectric point:5,63066
aromaticity:0,09655
hydropathy:-0,45569

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604 Coil
DC_0657
STR
1–577
DC_0657
YP_009812356.1
1 580
Architecture
ATT
STR
ATT 1-131 | STR 132-577 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage LL2
[NCBI] 		2301650 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Teetrevirus
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009812356.1 [NCBI]
Genbank nucleotide accession
NC_048063.1 [NCBI]
CDS location
range 33356 -> 35098
strand +
CDS
ATGGCTACAACTATTAAGACCGTGATGACTTACCCGCTGGATGGTTCAACTACGGACTTTAATATTCCGTTCGAGTATCTGGCGCGTAAGTTCGTCCGAGTGACCCTTATCGGTGTTGACCGAAAGGAACTCACCTTGAATCAAGACTATCGTTTTGCAACTAAGACCACAATCTCCACAACGAGAGCATTGGGGCCAGCGGACGGTTATAACCTTATCGAGATTCGGCGGTACACCTCAGCGACTGAACGTCTGGTTGACTTTACGGATGGCTCAATCCTCCGTGCGTATGACCTGAACATCTCGCAGGTGCAGACCCTCCACGTTGCTGAGGAAGCGCGTGACCTTACCGCTGATACGATTGGCGTTAACAACGATGGTGACTTGGATGCTCGTGGTCGTCGTATCGTGAACGTTGCGGACGCTAAAGACCCCGGTGACGCAATCAACTTAGGTCAAGTCCAGAAGTGGAACGACTCTGCGTTGAACTCTGCGAACCGCGCACGGGCTGAGGCCGACCGTGCAACTGTGCGTGCTTCAGAGGCTGCTACCTCTGCGGGTAACTCTGCGAGTTCTGCAAGCCTGTCCCGTGATTGGGCTATCAAGGAATCTCCGGTGGAAGGAACCTTTAAGTCTTCCCGGTCGTATGCCATTGACTCTATGGCGTACCGGGATGCGTCCAAGAGTTCTGCCGATGCTAGTGCTGCAAGTGCTGGTGCCGCTAAGACCTCTGAGATTAACGCGAATAACTCAAAAATCGCTGCGAAGACCTCTGAGACCAACGCGAAGACCTCTGAGAACAACGCTAAGGCTTCCGAGGAACGAGCCATTGAGGAAGCAAATAAGCTGGAGAACATGAATGATTTGGTTGGTGCAATTGATAAGGTAGATGGGGCAAATGTGTACTGGAAAGGAAATATTAACGCTAATGGGAGGCTTTTCCTGACCACAAACGGTTTTGACTGTGGACAGTATCAACAGTTCTTTGGTGGTGTTACTTATCGTTACTCTGTCATGGAGTGGGGCGATAAGGACGGATGGCATTTGTATTCCGAGAGGAAAACCGAAGGCGGGAGGCCAACGCTCAATGTAAATGGTGATGTGAGCGTCGGTTTTGACATTCGGACGGGTGCTAATCAATTTGCTAATCACATGTTTGTACACGACAGGGTACAATACTGGCCCGGTGCTGGCATGTTTGTTAACCAGTTGTCTGTCCCAGAAGCGCCATTTATCAAACAAGGGAGATATGAGGCCCCATCTGGTAACAGCTTATACGCCCCTATTGTTAAGGGAATCATACGGACGGCAGGTCACGGGTATGACACAGCGCTGTCCTTTGGTACTCTAACACAGGGTAACGGGTCGTTTGCTTCTGCGGGTATTCATGCGATTGGGGATAACGGCACTTCTGGTTTCTGGGAATTTAACCCTAACAATAGGTCCTTCCGTAGTCAAGGTGATGGGTTCTTTGGCAACACTACTGTCTATCAGGATGGTAACATCGGTGGCCCTACGTGGGGTGGCGACCTAGCGCACTGGCTCAGAGTAAATACGGTTAACCACATTGCTATGGGCGGAGTCAACCAGTCAATAGTGTGGAATAGCTACGGTGTTTCTGATGGTGGCGGCAAGGTAGTAACTGGCGTTGTAAACTCTAACGCTGATGGTGCGATAGACTATTGTCAGTGGCGTGTTATGCAATACGTTCGTAACGACGGTCAATGCTTTAATATTTACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
cb86d82e36d57a27d88611f32e9061e91bdde3c763b7dc40f5f7d8a25f6c9fec
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6918
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of Escherichia coli phage LL2 Rangan,R.S., O'Leary,C.J., Lauren,L. and Liu,M. 1970-08 — GenBank