Protein

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Genbank accession
YP_009831283.1 [GenBank]
Protein name
long tail fiber protein proximal connector
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MANNEFMALFGPDSFTANVFSEANAVKYRLVVRGTNNDSAVNSVEVSINGADIINRRTQVARGINLAVIDGTTLALLDYKAFDMYGDPATNGNAIKDYLNSLPANRIVCFYTFDAIKSDDNFLATMRKIGSVAWPETRFFSIPTTTNSNSQRSSYSAIYSSTMKKICMENFVGGSGTGLKDNTTSFVEVVFDEFSDIGVTGIPERMVDDVQTYQNSGDMYGFHLYGLWSIGNDVYLGDTFKFTGDLYCSKELRDAGGEVHLYMWTENGSGQWIKSTILRTTGLAPDTWHSLTGYFTIPTDAVNARMGSQVYHYPSTVKVGLAQCRNVQIAKVPREEVDRNGAAIGVNGIRMQTLSEVTATGTENPIEQLLSLPVSPTGVISDKKISSHNFAELDYIVSDPVEYTSTSTAEYQFKEWTATQQAAVTKASLSSYGLKAGDTIRMQCQMKRDANAIANSKSAYIVMQFWDADNKYIKGVGMVDSGTVPNIYSFYKAEGVVPAGAVTFDFGLYRYPNNTNIGTVSAKDVKLSIVR
Physico‐chemical
properties
protein length:531 AA
molecular weight: 58253,73530 Da
isoelectric point:5,25916
aromaticity:0,10734
hydropathy:-0,19962

Domains

Domains [InterPro]
DC_0004
STR
1–531
DC_0004
PS52031
LEC
24–206
PS52031
IPR039477
STR
62–132
IPR039477
YP_009831283.1
1 531
Architecture
STR
STR 1-531
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009831283.1
1 531
Domain Start End Length (AA) Confidence
N-terminal 1 71 71 0,1596
Central domain 72 270 200 0,6137
C-terminal 271 531 260 0,3997
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-71
Central
72-270
C-terminal
271-531

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage vB_CsaM_leB
[NCBI] 		1885242 Uroviricota > Caudoviricetes > Pantevenvirales > Pseudotevenvirus > Pseudotevenvirus leb
Host Cronobacter sakazakii
[NCBI] 		28141 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009831283.1 [NCBI]
Genbank nucleotide accession
NC_048645 [NCBI]
CDS location
range 167186 -> 168781
strand +
CDS
ATGGCGAATAACGAATTTATGGCGTTATTCGGCCCTGATAGTTTCACGGCGAATGTGTTTTCAGAAGCAAACGCCGTGAAATATCGCCTTGTTGTCCGTGGAACGAATAACGATTCTGCGGTCAACTCGGTTGAGGTATCTATTAACGGGGCTGATATTATAAACAGACGAACACAAGTTGCTCGCGGAATTAACCTGGCTGTCATTGATGGAACAACTTTAGCATTATTGGATTACAAAGCATTCGATATGTATGGTGATCCTGCTACGAACGGGAATGCGATTAAAGACTACCTGAATTCACTTCCAGCGAACAGAATTGTGTGTTTTTATACTTTCGATGCTATCAAAAGTGATGACAACTTTTTAGCAACAATGAGGAAAATTGGTTCTGTTGCATGGCCTGAAACACGATTCTTTAGTATTCCGACGACAACAAACAGCAATTCCCAACGTTCATCTTATTCAGCTATCTATTCATCTACGATGAAAAAGATCTGTATGGAAAACTTTGTGGGTGGTTCTGGTACGGGGTTGAAAGACAATACAACGAGTTTTGTTGAAGTTGTGTTTGATGAATTTAGTGATATCGGGGTAACTGGTATTCCTGAAAGAATGGTTGATGATGTCCAGACATACCAGAACAGCGGGGATATGTACGGCTTCCATTTATACGGATTGTGGTCAATCGGTAATGATGTTTATCTGGGTGACACCTTCAAATTTACTGGGGATCTGTATTGTTCAAAAGAACTTCGTGATGCTGGGGGAGAAGTTCACCTGTATATGTGGACAGAAAACGGTAGCGGACAATGGATCAAATCAACCATTCTCAGAACAACCGGATTAGCCCCTGATACATGGCATTCGTTAACAGGATATTTCACTATTCCTACTGATGCGGTAAATGCTCGAATGGGTTCACAGGTGTATCATTATCCGTCAACTGTAAAAGTCGGGCTTGCTCAGTGTCGAAATGTCCAAATTGCTAAAGTACCGCGCGAAGAAGTAGATCGTAACGGTGCTGCGATCGGTGTGAACGGTATACGAATGCAAACACTTTCCGAAGTGACTGCAACAGGAACAGAAAACCCGATTGAACAATTGCTTTCTCTGCCTGTTTCGCCTACTGGGGTTATCAGTGACAAGAAGATCAGTTCGCATAACTTTGCTGAACTTGATTATATTGTTTCTGATCCGGTTGAATATACTTCGACAAGCACAGCGGAATACCAGTTCAAAGAATGGACTGCTACCCAGCAAGCGGCGGTAACGAAAGCGTCACTAAGCAGTTACGGATTAAAAGCTGGTGATACGATCCGTATGCAATGCCAAATGAAACGCGATGCGAATGCGATTGCTAACAGTAAATCAGCATATATCGTAATGCAGTTCTGGGACGCTGATAACAAATATATTAAAGGGGTCGGTATGGTTGATTCCGGTACGGTTCCAAACATATATTCGTTCTATAAAGCAGAAGGGGTTGTTCCTGCTGGTGCGGTTACGTTTGATTTCGGTTTATATCGTTATCCAAACAACACAAACATCGGTACGGTATCCGCTAAAGACGTTAAACTGTCAATCGTGAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dacc6a127d7cb57352bbfdf1fb2811df8640eb4dac4c66a963db3345806baf1c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6529
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50