Protein

View in Explore
Genbank accession
UAW59278.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAGYTRQSAPDIINGAEITAPPLIAEFNQIEAGFSGVSGHTHDGTTGNAPKINLQTSVTGYLLPINGGTGGKNNNTATANPTITDDVNAGYAPGNIWLNTTTGRFFVCANNTASAAVWNEVVGVDSATSKIYPETTNTVDIGSTTNRYKDLYLAGSISGTANATFGGTLNVTGTTTLSDVNATGNATVGGTLGVTGLATLAQVDANSGTIDNTVIGGNTASPITGTTITSTNGFTGDITGDVTGNVTAATGTSSFNNINASGTITGNVTGDITGNVTAATGTSSFNNVTISGTLNMDGATTATIQNLTDPTNPQDAATRNYVDTELAALVDAAPAALDTLNELAAALGDDANFSTTMTNALAGKVADTGDTMTGNLIMSGATVTGLPLPTANTEAASKQYTDQQDALQVSRSGDSMSGQLAMGTNKIVNLGTPTAGTDAANKTYVDGILGSATAASASAAAAATSEANAAVSEANALASENTARDWAIKTSGTVDGTNYSAKYWATQADVGTVATNIADINAVAADIANVNLTGGSIASVNTVANNINNLNDFFDTYFVSATAPAAPTYSVTEGDLWFDTTSQVLKVRSTSGWQNAGSSVNGTAERQDYTATSGQTSFAAVYDTGYVDVYLNGVKLAPSDFTATDGANVVLGSAAAAGDSVSIVSFGTFQLADHYSRTASDARFAQLSNNLSDLADAATARTNLGLVIGTDVQAFNTNLAGIDQGLATTDSPTFATANLTTVDFGDWTITESGGSLYFATGGTNKMKLDANGNLDVVGSVNSNATIT
Physico‐chemical
properties
protein length:787 AA
molecular weight: 79209,99180 Da
isoelectric point:4,05003
aromaticity:0,06099
hydropathy:-0,06455

Domains

Domains [InterPro]
DC_1798
ATT
2–188
DC_1798 IPR051934 DC_2093
DC_0577
STR
305–502
DC_0577
UAW59278.1
1 787
Architecture
ATT
STR
ATT 2-188 | STR 305-777 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage CRP-738
[NCBI] 		2873409 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Rhodobacteraceae bacterium
[NCBI] 		1904441 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UAW59278.1 [NCBI]
Genbank nucleotide accession
MZ892992.1 [NCBI]
CDS location
range 30711 -> 33074
strand -
CDS
ATGGCAGGTTATACACGGCAATCCGCACCTGATATTATCAACGGCGCAGAGATTACAGCACCACCACTCATCGCTGAATTTAACCAGATTGAGGCGGGTTTTAGTGGTGTAAGTGGTCACACCCATGACGGTACTACAGGTAATGCGCCTAAGATCAATCTACAGACATCAGTAACTGGTTACCTACTGCCTATCAACGGTGGTACAGGTGGTAAGAACAACAACACTGCGACTGCTAATCCTACTATTACAGATGATGTAAATGCAGGTTATGCACCGGGAAATATATGGTTAAACACTACCACAGGCCGCTTCTTTGTATGTGCTAATAACACAGCGTCTGCAGCGGTATGGAATGAAGTTGTTGGCGTAGATAGTGCTACAAGCAAAATCTATCCTGAAACAACCAACACTGTAGACATTGGCTCAACAACCAACCGCTACAAAGACCTTTACCTAGCGGGTTCCATCTCTGGTACAGCCAACGCCACTTTCGGCGGTACGCTTAACGTCACTGGTACAACCACACTCTCAGACGTTAACGCTACAGGCAATGCCACAGTGGGCGGCACTCTAGGTGTTACTGGCCTAGCAACACTTGCACAGGTTGATGCTAACTCTGGTACAATCGACAACACCGTTATCGGGGGCAATACAGCCTCACCGATCACTGGTACGACGATCACTTCTACCAACGGCTTCACAGGCGATATTACAGGTGATGTCACTGGTAACGTAACAGCGGCTACTGGTACTTCTAGCTTCAATAATATCAACGCATCAGGCACTATTACAGGCAACGTCACTGGCGACATTACTGGTAACGTAACTGCAGCCACAGGCACCTCTAGCTTTAACAACGTAACGATCTCAGGCACACTGAACATGGACGGGGCGACTACAGCTACCATCCAAAACCTGACTGATCCGACAAACCCCCAAGACGCAGCCACACGTAATTATGTTGATACGGAGCTTGCAGCCTTAGTTGATGCAGCACCAGCGGCTCTAGATACACTAAATGAACTAGCCGCTGCGCTTGGTGATGATGCTAACTTCAGTACCACAATGACCAATGCCTTAGCGGGTAAAGTTGCGGATACTGGCGACACCATGACAGGCAACCTGATCATGTCTGGTGCAACAGTCACTGGCCTACCGCTACCTACAGCCAACACTGAGGCGGCATCTAAGCAGTACACTGACCAACAGGATGCTCTACAGGTATCCCGCTCTGGCGATAGTATGTCAGGTCAACTTGCAATGGGTACCAACAAGATCGTTAACTTAGGTACTCCAACGGCAGGAACAGACGCAGCAAACAAAACTTATGTGGATGGCATCCTCGGCTCTGCTACAGCGGCTTCTGCCTCGGCAGCGGCGGCAGCTACCTCTGAGGCAAATGCTGCAGTATCTGAAGCTAACGCACTGGCCTCTGAGAACACTGCTAGAGATTGGGCAATCAAGACTAGCGGTACTGTCGATGGTACTAATTACTCAGCTAAATATTGGGCGACACAGGCTGACGTTGGGACTGTTGCGACCAACATAGCGGATATAAATGCAGTCGCCGCCGATATTGCCAACGTGAACCTCACTGGAGGGTCAATTGCATCAGTCAATACTGTGGCGAATAATATCAATAATCTGAATGATTTTTTCGATACATACTTCGTTTCAGCTACCGCTCCTGCAGCACCGACATACAGCGTCACAGAGGGTGATCTCTGGTTCGATACGACTTCACAGGTTCTTAAAGTTCGCTCTACAAGTGGGTGGCAGAATGCGGGTTCCTCAGTAAACGGAACAGCGGAGCGTCAGGACTACACCGCTACCTCTGGTCAAACATCTTTTGCTGCAGTCTACGACACAGGCTACGTCGATGTATATTTGAATGGTGTTAAACTAGCCCCATCAGATTTTACGGCTACAGACGGAGCTAATGTAGTTCTTGGTAGCGCAGCGGCGGCAGGAGATTCAGTTTCTATTGTTTCATTTGGAACTTTCCAACTGGCAGACCACTATAGCAGAACTGCATCAGACGCACGATTTGCTCAACTGTCGAATAACCTTTCTGATTTAGCAGACGCAGCTACAGCACGTACAAACTTGGGTTTGGTAATAGGTACAGACGTACAGGCATTCAACACAAACCTAGCAGGTATTGACCAAGGTTTAGCCACAACTGATAGCCCGACTTTTGCAACTGCCAATCTTACAACAGTAGACTTTGGTGATTGGACTATCACTGAAAGCGGCGGCTCTTTGTACTTTGCCACAGGCGGCACAAACAAAATGAAATTAGACGCAAACGGTAACTTGGATGTTGTCGGCAGCGTAAACTCTAACGCAACAATCACCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
428b5900b06d455d5b47e0fd0339bf616f0002b7bfd03bc23f59449fac228cb0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3443
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Newly identified HMO-2011-type phages reveal genomic diversity and biogeographic pattern of marine HMO-2011-type group Qin,F., Du,S., Zhang,Z., Ying,H., Wu,Y., Yang,M. and Zhao,Y. 2022-01-12 — GenBank