Protein

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Genbank accession
BCK59799.1 [GenBank]
Protein name
structural protein
RBP type
TSP
Evidence RBPdetect
Probability 0,85
Protein sequence
MYPKVNEMGDYLKGEVKTSDLKTISYPELNNVLNFLRDSGDYFVTSARNTPQGVSNIGFDLLDKKGSTYIKLYYAPSNINKLFVTSYYNDTVPTWVSFKQDETTLYDSGNTINVKNLTESTAQFAELMSPPKSNLNTGWINYKESKNGTSALAEFNPINSTSTFKMIRKLPRQDHQPKAPKDSPFTFRMTDVANIRTDYIDLTSFWGFTNNASTSTVRYMGENTIQKDDGGESYPTVMSKRFRIGDELYEGDTVTMSVHIKVNDPNLLNGNFPYFEIAGYNYVYQDNNSYTGGRREVNYYELSTEWKKFLFTFTLQSYDQEYSHDRVNYISALLRFNCSVSTNNGAIVYYADPKLEKSYSVTPFITLTYDKRKKNEIWSHWIDTTNKDELQSHSSVDTYSNDYFKYVKYYPSSNGRSLQQLAMSVPQGFYTFYCDGSISGTPSSKTIQGTIYVAYKNNNINTTNKVIQMDFSDTKGKKYSPTYNKDKNGWQDMKVQLASNNNWKGTLDLASGKTVNLSDSLDNYDFIDVVYWTRPSGHNATRRFPTTTSSIVIRDSHLVNDGSNTSVDRFEGYCDITDKINVTAKMLETINLDGNRNTTTVARFNPTGHIEVLRVIGLTYI
Physico‐chemical
properties
protein length:621 AA
molecular weight: 70892,92310 Da
isoelectric point:6,73232
aromaticity:0,13043
hydropathy:-0,65250

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BCK59799.1
1 621
Domain Start End Length (AA) Confidence
N-terminal 1 130 130 0,9776
Central domain 131 329 200 0,2020
C-terminal 330 621 291 0,8063
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-130
Central
131-329
C-terminal
330-621

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage vB_SauH_DELF3
[NCBI] 		2766478 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BCK59799.1 [NCBI]
Genbank nucleotide accession
LC576631 [NCBI]
CDS location
range 80320 -> 82185
strand +
CDS
ATGTACCCTAAAGTAAATGAAATGGGTGACTACTTAAAAGGAGAAGTTAAGACATCTGATTTAAAAACGATTAGTTATCCTGAGTTAAATAATGTTTTAAATTTCTTACGAGACTCAGGTGACTACTTTGTAACATCTGCAAGAAACACCCCGCAAGGTGTAAGTAATATAGGGTTTGACCTGTTAGATAAAAAGGGTAGTACTTATATAAAGTTATATTATGCCCCATCTAACATAAATAAATTGTTTGTGACGTCTTATTATAATGATACTGTCCCGACTTGGGTTAGTTTTAAACAAGATGAAACTACACTATACGATTCAGGAAATACAATTAATGTAAAAAATTTAACAGAGTCCACAGCTCAATTTGCAGAACTAATGTCTCCCCCTAAAAGTAATTTAAACACAGGATGGATAAATTATAAGGAAAGTAAAAATGGTACCTCAGCTTTAGCTGAATTTAATCCTATTAATTCTACTTCAACATTTAAAATGATTAGAAAGTTACCACGCCAAGACCATCAACCTAAGGCACCGAAGGATAGTCCGTTCACATTTAGAATGACGGATGTAGCTAATATAAGAACGGATTATATAGATCTGACATCTTTTTGGGGTTTTACTAATAATGCATCTACCTCAACAGTTAGATATATGGGTGAAAATACTATTCAAAAGGATGATGGAGGAGAATCATATCCTACAGTTATGTCAAAACGATTTAGAATAGGAGACGAACTATATGAAGGAGATACTGTTACAATGTCTGTTCATATTAAAGTAAATGACCCTAATTTGTTAAATGGTAATTTCCCCTACTTTGAGATTGCTGGGTATAATTATGTTTATCAAGACAATAACTCCTACACAGGAGGTAGGAGAGAGGTTAACTATTATGAATTATCTACGGAGTGGAAAAAGTTCCTATTTACTTTTACTTTACAATCATATGACCAAGAGTATAGTCATGATAGGGTTAATTATATATCAGCCCTACTAAGATTTAACTGCTCAGTTTCTACTAATAATGGAGCTATTGTGTATTATGCTGACCCAAAATTAGAAAAATCATACTCGGTAACTCCTTTTATTACTCTTACTTATGATAAAAGAAAAAAGAATGAAATATGGAGTCATTGGATTGACACAACAAATAAAGATGAGCTTCAATCACACAGTAGCGTAGATACATATAGTAATGACTACTTTAAATACGTAAAGTATTACCCGAGCTCGAATGGTAGAAGTCTGCAACAATTAGCAATGTCGGTACCTCAAGGTTTTTATACCTTCTACTGTGATGGTTCTATAAGTGGCACTCCTAGTAGTAAAACAATACAAGGCACCATATATGTAGCGTATAAAAATAATAATATAAACACCACAAATAAAGTAATACAAATGGATTTTAGTGATACTAAAGGCAAGAAATATTCTCCTACATATAATAAAGATAAAAATGGTTGGCAAGACATGAAAGTTCAACTGGCTAGTAATAATAATTGGAAAGGAACGCTTGACCTTGCTTCAGGGAAAACAGTAAATCTATCAGATTCGTTAGATAACTATGATTTTATTGACGTAGTATATTGGACTAGACCATCTGGACATAATGCAACTAGAAGATTCCCTACTACTACATCTAGTATTGTAATTAGAGACTCGCACTTAGTAAATGATGGCTCTAATACTAGCGTAGATCGCTTTGAAGGATATTGTGACATTACTGATAAGATAAACGTCACTGCTAAAATGTTAGAAACAATTAACCTAGATGGAAATAGAAATACCACAACAGTCGCTAGATTCAATCCAACAGGTCACATTGAAGTACTAAGAGTAATAGGGTTAACATATATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
23e8371edfe9e004dd8b8e6934e361b6705ee340f9ebb2b26c66dfa53cf459bf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5513
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
genome analysis of Staphylococcus aureus vB_SauH_DELF3 lytic bacteriophage Soleimani-Delfan,A., Bouzari,M. and Wang,R. 2021-10-02 — GenBank