Protein

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Genbank accession
QYC52258.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MYSPRPYGRFAEDAELSADDAAAVERLARNLTNFKQASDLANLKRVAGLPSGRQAVAIDMGGVFRILVLEQHELPQFRFDGVAQTNIPMLFSGVITRAQVLTDGQGVGIRLTEQARRRLVAYDPKAALPPKDVALQRFVIKYEPRFQYFEPREQGIYTFTQYVKQRPTWYSGAMAEVMQVAGGYGRQVMAELPEDDLERARMLIPERYMHRIRQEVGNVRLPAYTGFPDEQGQFKCDYLASRCNAVAFDAGNSPWLLQINARGVYAMPLPVVPATTTEAFRDYVLDVGDDELLKLLDRFGGMPTGEGFPQPEQEFEAWRRAGVIVKVCDTADFYNFEAMYAACGWAVNSRGTEGFNTCWTYDDAGLMQVHAYKMSLSLAPAENQGRLKNTWNFDDPDDAAKLNAYLAQVYGALTDGTARELAIKYKIRRVPAGEILSRASSASGPDLDYWDSLELPPIATHQGRVSRVASGPFYWPSKVLKSCTRLKFPELTGQGCESFPHISPDYSGGAVKCDTIVFGCYVEDQLRVIKYFYDERKFQQETTSTFEQYMIVGQWEKTETFGLSGLMGFFYTTDFDDRQEQPAVTVHTNIVGTDMGYGNPAYSTPPTLWCVGGVSRSRYYMHRTTVDTTETFTLDVAALVPVFERDCMLYAYQDHTGGRSSHEETTQGSVPDPTSYELWCYDDIWHWMGQTRNGNRGDPPSKDGVPVYVDTLVYSPTEISDFAESGNWLNLPPGGFLDVTGICGPYTYRNSVHNANGVIIGGEAPGFDPYRKDTQYPNESSGRLSVCLSVAGAVQVNKDMPHSWYWGFSPENDFYFYRDAVHVAIGDARYASIYETGQDGLRRRWGHTALADHKAAHHFIGVINE
Physico‐chemical
properties
protein length:865 AA
molecular weight: 97018,67230 Da
isoelectric point:5,20437
aromaticity:0,12254
hydropathy:-0,39618

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QYC52258.1
1 865
Domain Start End Length (AA) Confidence
N-terminal 1 137 137 0,9794
Central domain 138 473 337 0,7423
C-terminal 474 865 391 0,4691
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-137
Central
138-473
C-terminal
474-865

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PA8
[NCBI] 		2860997 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QYC52258.1 [NCBI]
Genbank nucleotide accession
MZ285879 [NCBI]
CDS location
range 944 -> 3541
strand -
CDS
ATGTATTCGCCGCGCCCCTACGGACGTTTCGCGGAAGACGCGGAGCTTTCCGCCGACGATGCCGCCGCTGTCGAGCGGCTGGCCAGGAACCTGACGAACTTCAAGCAGGCGTCTGACCTCGCCAACCTGAAGCGCGTTGCGGGCCTGCCCAGCGGCCGGCAGGCGGTGGCCATCGACATGGGCGGAGTGTTTCGCATCCTGGTGCTCGAGCAGCATGAGCTTCCGCAATTCCGTTTCGACGGGGTGGCACAGACCAACATCCCCATGCTGTTCTCCGGCGTCATCACCCGCGCCCAGGTGCTGACCGATGGGCAGGGCGTTGGCATAAGGTTGACCGAGCAGGCCCGGCGCCGGCTGGTGGCCTACGACCCGAAAGCGGCGCTTCCGCCGAAGGACGTGGCGTTGCAACGCTTCGTCATCAAGTACGAACCTCGTTTCCAATACTTCGAGCCGCGCGAGCAGGGCATCTACACATTCACTCAGTACGTCAAGCAGCGCCCGACCTGGTACAGCGGCGCCATGGCCGAGGTCATGCAGGTGGCTGGCGGATATGGGCGGCAGGTCATGGCCGAACTGCCAGAGGACGACCTTGAGCGCGCAAGGATGCTGATTCCTGAGCGCTACATGCACCGCATCCGCCAGGAAGTCGGCAACGTTCGGCTGCCGGCCTACACAGGCTTTCCGGACGAGCAAGGCCAGTTCAAATGTGACTACCTCGCCAGCCGCTGCAACGCCGTCGCTTTCGATGCCGGCAACAGTCCGTGGTTGCTGCAGATCAATGCGCGGGGCGTCTACGCGATGCCGCTTCCTGTGGTGCCGGCCACCACCACCGAGGCTTTCCGTGACTACGTGCTGGATGTTGGTGACGACGAGCTGCTGAAGCTTCTGGACCGCTTCGGCGGCATGCCTACTGGTGAGGGGTTCCCACAGCCGGAACAGGAGTTCGAGGCGTGGCGCCGGGCCGGCGTCATCGTCAAGGTCTGCGACACCGCCGACTTCTACAATTTCGAGGCCATGTACGCGGCGTGTGGCTGGGCGGTGAACAGCCGAGGCACCGAGGGCTTCAACACCTGCTGGACCTATGACGACGCCGGCCTGATGCAGGTCCATGCGTACAAGATGAGTCTGTCGCTGGCCCCGGCGGAGAACCAGGGGCGACTGAAGAACACCTGGAATTTCGATGATCCAGACGATGCAGCGAAACTCAACGCCTACCTGGCCCAGGTCTATGGCGCGCTGACCGATGGCACCGCCAGAGAACTGGCCATCAAGTATAAGATTCGGCGGGTGCCGGCTGGTGAGATTCTCTCGCGCGCCTCTTCGGCCAGCGGCCCGGATCTGGACTACTGGGACAGCCTGGAACTACCTCCCATCGCCACCCACCAGGGCCGAGTGTCGCGCGTCGCCAGTGGCCCTTTCTACTGGCCGTCCAAGGTCTTGAAGTCCTGCACCCGCCTGAAGTTCCCCGAACTGACGGGGCAGGGGTGCGAGTCCTTCCCGCACATCTCGCCCGACTATTCCGGCGGCGCAGTGAAGTGCGACACCATAGTCTTCGGCTGCTATGTCGAGGACCAATTGCGTGTCATCAAGTATTTCTACGACGAACGCAAGTTCCAGCAGGAAACGACAAGTACGTTCGAGCAGTACATGATCGTCGGCCAGTGGGAGAAGACCGAGACCTTCGGCCTCAGCGGGCTGATGGGGTTCTTCTACACGACCGACTTCGACGATCGGCAGGAGCAGCCGGCGGTAACGGTCCATACCAACATCGTCGGCACCGATATGGGCTACGGCAACCCGGCTTACTCCACTCCGCCGACGCTTTGGTGCGTCGGCGGCGTGAGCCGGTCCAGGTATTACATGCACCGCACCACGGTAGACACTACCGAGACGTTTACCCTGGACGTGGCGGCGCTGGTGCCGGTGTTCGAGCGCGATTGCATGCTCTACGCCTACCAGGACCATACCGGGGGACGCAGTTCCCACGAGGAAACGACGCAGGGCTCTGTGCCTGATCCCACGTCCTACGAACTCTGGTGCTACGACGACATCTGGCACTGGATGGGGCAGACGCGGAACGGGAACCGGGGCGACCCGCCATCCAAGGATGGGGTGCCTGTCTATGTCGACACGCTGGTCTACAGCCCCACCGAAATCAGCGACTTCGCCGAGAGTGGCAACTGGCTGAACCTGCCACCTGGCGGGTTTCTGGATGTCACTGGCATCTGTGGGCCGTACACCTACCGCAACTCCGTCCACAACGCCAACGGCGTCATCATCGGCGGCGAGGCGCCAGGCTTCGATCCGTACCGGAAGGACACCCAGTACCCCAACGAGAGTAGCGGGCGCCTGAGTGTGTGCCTGTCCGTGGCCGGCGCTGTTCAGGTCAACAAGGACATGCCGCACTCGTGGTACTGGGGCTTCTCGCCCGAGAACGACTTTTACTTCTACCGCGACGCCGTGCATGTCGCCATCGGCGACGCCCGGTACGCCAGCATCTACGAGACGGGCCAGGATGGACTGCGCCGCCGCTGGGGGCATACCGCACTTGCCGATCACAAGGCGGCCCACCACTTCATAGGGGTTATCAATGAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ceca52b45c642249f527d36c7ce572678d57c9576d16b3beda28bb59ca66fae9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2952
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50