Protein

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Genbank accession
AAR97675.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
Protein sequence
MSVQSTDRVAGPYPCNGLTTQFPFDFKVFNTGEVVAILSDADGVESTLTLGTDYTVALNDNQDSNPGGTLTTLATYATGYKITLTSEVPNTQPETLTNQGGFYPKVIEHALDRLVIQIQQLADKLSRTVQAPISGGLSSSEILEQLAEQLPLVSAVYGHLANIDAVATNEADIDTVAASVGAVDTVAGDLGGTWAAGVSYDFGSIAVPPIGNTSPPGGNIVIVANSIGNVDTVAENIGDVSTVSTHLSSMLAVANDIDSVVSVAGDLENIDAVADNAANINTVAGANANVNTVASNILDVGTVAGNIDDVQAVAGNAANINVVADNADNINATAANQANINAAVGNADNINAAVANQANINAVVGNANNINAVAANEGNVNTVVDNLADVQTVAGIAADVSTVAENEAAVAALGNDLTGQPMVIDYGDLSPASNPAAPAGVLGAVWANAENIAAVAENIAVIIEAANNLPAILAALSGALVPANNLSDLADPAAARANIGLADLGGIA
Physico‐chemical
properties
protein length:508 AA
molecular weight: 50683,21390 Da
isoelectric point:4,05003
aromaticity:0,03150
hydropathy:0,26890

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bordetella phage BPP-1
[NCBI] 		2885909 Uroviricota > Caudoviricetes > Rauchvirus >
Host Bordetella bronchiseptica
[NCBI] 		518 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAR97675.1 [NCBI]
Genbank nucleotide accession
AY029185.2 [NCBI]
CDS location
range 4599 -> 6125
strand -
CDS
ATGTCCGTCCAAAGCACAGATCGGGTCGCGGGGCCGTATCCCTGCAATGGCCTGACCACACAATTCCCGTTCGACTTCAAGGTGTTCAACACCGGCGAAGTCGTCGCCATTTTGAGCGACGCAGACGGTGTGGAATCCACCTTGACCCTGGGTACGGACTACACCGTTGCGCTGAATGACAACCAGGACTCCAATCCCGGCGGCACACTCACCACGCTGGCGACCTATGCCACTGGTTACAAGATCACGCTGACCAGCGAAGTCCCTAATACCCAGCCCGAAACCCTGACCAACCAGGGCGGCTTCTACCCCAAGGTCATCGAGCACGCGCTTGACCGGCTGGTTATCCAAATCCAGCAACTCGCCGACAAACTTAGCCGAACCGTGCAGGCCCCCATTTCTGGCGGTCTGTCATCGAGCGAGATTTTGGAGCAGCTTGCTGAACAGCTACCGCTGGTTTCCGCCGTGTACGGCCACCTCGCCAACATCGACGCCGTGGCTACCAACGAGGCGGACATCGACACGGTGGCGGCCAGCGTTGGCGCCGTCGATACCGTGGCGGGCGACCTGGGCGGAACCTGGGCGGCCGGCGTGTCCTACGACTTTGGCAGCATCGCCGTACCCCCCATCGGCAACACCTCGCCGCCCGGCGGGAACATCGTCATTGTCGCAAACAGTATCGGCAACGTGGACACGGTTGCTGAAAACATCGGCGACGTGAGCACCGTCAGCACGCACCTGTCGAGCATGTTGGCTGTCGCCAACGACATCGACAGCGTGGTATCCGTGGCCGGCGACCTGGAAAATATCGACGCCGTGGCCGACAACGCCGCGAACATCAACACGGTGGCCGGTGCCAACGCCAACGTCAACACCGTGGCGTCCAACATCCTCGACGTGGGCACGGTAGCCGGCAATATCGACGACGTGCAGGCGGTGGCAGGCAATGCGGCAAACATCAACGTCGTAGCCGACAACGCAGACAACATCAATGCGACCGCTGCTAACCAAGCGAACATCAATGCAGCGGTCGGCAATGCCGACAACATCAATGCAGCGGTCGCCAACCAGGCGAATATCAACGCAGTAGTCGGTAATGCCAACAATATCAATGCGGTAGCGGCGAACGAAGGAAACGTCAACACGGTTGTCGATAACCTCGCAGACGTGCAGACCGTCGCGGGCATCGCTGCCGACGTTTCCACCGTGGCCGAAAACGAGGCCGCCGTCGCCGCGCTGGGCAACGACCTGACCGGGCAACCTATGGTCATCGACTACGGCGACCTGTCGCCGGCCAGCAATCCCGCAGCGCCAGCCGGCGTGCTGGGCGCAGTGTGGGCGAACGCCGAGAACATCGCGGCCGTGGCCGAGAACATCGCGGTCATCATCGAAGCAGCCAACAACTTGCCGGCCATTCTCGCCGCGCTATCCGGCGCGCTGGTGCCCGCCAACAACCTGTCCGATCTTGCCGACCCTGCGGCAGCGCGGGCCAACATTGGCCTGGCTGACCTGGGCGGCATCGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e09c1568dbf8718c2f603f5619cd8b3e137d0c4d284b37264d1755782f54ee2f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7314
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and genetic analysis of Bordetella bacteriophages encoding reverse transcriptase-mediated tropism-switching cassettes Liu,M., Gingery,M., Doulatov,S.R., Liu,Y., Hodes,A., Baker,S., Davis,P., Simmonds,M., Churcher,C., Mungall,K., Quail,M.A., Preston,A., Harvill,E.T., Maskell,D.J., Eiserling,F.A., Parkhill,J. and Miller,J.F. 2004 14973019 GenBank
Generalized transduction in Bordetella bronchiseptica and Bordetella pertussis Liu,M., Martinez de Tejada,G., Bruhn,K.W., Cotter,P.A. and Miller,J.F. 1967-05 — GenBank