Protein

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Genbank accession
QBX06107.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,98
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MSSINIPGFGYSAVPESPNDGQLYGRRNATWELIALSDGVLEAPADGQEYVRKDFQWVLPTYPTYTANDITLTSTLLDSINVHDALEELYYNDPLNVVYVRSEADLPSPQLINGVLTHKLEGKEYVIDGDVDISNALGFPGPGISATIKAVNRSVLTYTGTDAMFHDLGAQGNIEIAGQTEFNAPNADMFNLISGAGGFSFQSRYADRFNNCASLGEVYCGGLSTIVFNNGTFRNFNQGLIVHDPGFFEVNTFFVFGNNQAGCTYFTVQGTSSTGSINIDTVTCSLGTNETIFNFDPNIQDTIDTINVRNCTLRGALNGTIFAPGSLTPRDYKFESIGNTLIGNTVHGGLLSLTDNATPTIVGAVNTPTLAAGTWVVQETSHFSATTAGRLTSQVIRTISTSIDASVSVQPSSGNGVVIRCYLAINGVPIIGSAKTTTADNGKAGNLSLSWQLDVSEGDYIELYVENRTGSTSIIVSDATLRIP
Physico‐chemical
properties
protein length:484 AA
molecular weight: 51675,76850 Da
isoelectric point:4,42625
aromaticity:0,09091
hydropathy:-0,03533

Domains

Domains [InterPro]
G3DSA:6.20.230.10
ATT
13–35
G3DSA:6.20.230.10 G3DSA:6.20.230.10
DC_0529
STR
56–484
DC_0529
QBX06107.1
1 484
Architecture
ATT
ATT
STR
ATT 13-35 | ATT 39-61 | STR 62-484
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX06107.1
1 484
Domain Start End Length (AA) Confidence
N-terminal 1 117 117 0,9611
Central domain 118 346 230 0,9781
C-terminal 347 484 137 0,9907
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-117
Central
118-346
C-terminal
347-484

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Va3
[NCBI] 		2563734 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio alginolyticus
[NCBI] 		663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX06107.1 [NCBI]
Genbank nucleotide accession
MK568540 [NCBI]
CDS location
range 96864 -> 98318
strand -
CDS
ATGTCAAGTATTAATATACCTGGCTTCGGCTATTCTGCTGTACCTGAATCACCAAATGACGGTCAGCTATACGGTAGACGAAATGCCACATGGGAGTTAATCGCTCTCTCAGATGGTGTACTTGAAGCACCTGCCGACGGGCAAGAATACGTAAGAAAAGACTTTCAATGGGTTTTACCAACGTACCCGACATATACAGCAAATGACATTACATTGACATCTACGCTATTAGATTCAATTAACGTACATGATGCACTTGAAGAGCTTTATTACAACGACCCGCTAAATGTTGTTTACGTTCGAAGTGAAGCCGATTTACCTTCACCTCAGCTAATCAACGGGGTTCTTACCCATAAACTCGAAGGGAAAGAGTATGTAATTGATGGTGACGTTGATATATCGAATGCTCTAGGGTTCCCGGGACCGGGCATCAGCGCGACAATCAAAGCAGTCAATCGTTCAGTGCTAACTTACACAGGGACAGATGCAATGTTCCACGATCTAGGCGCTCAAGGAAACATTGAAATTGCTGGTCAGACTGAGTTTAATGCGCCGAATGCTGATATGTTCAATTTGATTTCAGGTGCAGGTGGGTTCTCGTTTCAGTCGAGATATGCAGACCGATTCAACAACTGTGCAAGTCTAGGTGAGGTTTATTGTGGTGGTCTTTCGACTATCGTGTTCAATAACGGTACATTTAGAAACTTCAATCAGGGATTGATTGTTCACGACCCTGGCTTTTTCGAAGTTAATACGTTCTTCGTGTTTGGTAATAACCAAGCAGGTTGTACTTATTTCACTGTACAGGGTACATCGTCAACTGGTTCAATTAACATAGATACAGTTACGTGCTCACTAGGTACAAACGAGACGATCTTTAATTTCGATCCGAATATTCAAGATACTATTGATACAATCAACGTTCGTAACTGTACGTTACGCGGTGCATTGAATGGTACGATATTTGCACCGGGAAGTTTGACACCTCGCGATTACAAATTTGAAAGTATCGGTAACACACTAATCGGTAACACAGTACACGGTGGCTTGCTGTCACTTACAGATAATGCAACGCCTACAATTGTTGGTGCTGTCAATACACCGACTTTAGCAGCGGGAACATGGGTTGTACAAGAAACATCACACTTCTCAGCAACGACGGCTGGTCGCTTAACGTCACAAGTAATAAGAACAATTTCGACTAGCATAGATGCATCTGTAAGTGTACAACCATCGTCAGGTAACGGTGTTGTGATTCGATGCTATCTCGCTATTAACGGTGTTCCTATCATAGGGAGCGCGAAGACGACGACTGCTGATAATGGCAAGGCTGGTAACTTGTCTCTTTCATGGCAATTGGACGTTTCAGAGGGTGATTACATTGAATTGTATGTCGAGAATAGAACTGGTTCGACATCAATTATCGTATCTGACGCAACGTTACGCATCCCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
246ae9e2387280feea9b638e4ffcb5f3487137268dff52d414dcc2577a7f3d22
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8013
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50