Protein

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Genbank accession
WPF65046.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MQALARGGYSAQQVMDVLHAKHKPRNVRFRYDLLDRNLNYKRTLKNVLEGEVAFAAFATIKRTGKFKIEEEYVPAHIDRAERTVITKLGSIAEDPAFSFDNWVKTDAIVEASSKDLILQRFSGTISNHELETGWRTVNIYADGWMAGGFIPWYSDTKYRVAQGGGWQGSWAQEITRLTSGAYPVGMQTGIDSGGGYTATNSLVALSGGQKVYCSFYFRTFNGEVNPNYIYAMGGGGNFKLDQVTYTPTGYNGWVRCDAVGTCPAGRPSQTYGLLIACDSAVNNGICNYDNIYYGTNRPIYSGMATSPIIDVSNKTTLGKDIARVKSSVLIFGDKGGTPTNQGSWMPPRGMKARYSTDGGTTWSAWNNVSYAGSIVPAGTDATNLRVQLQYSMSRWNSYDDVRLGNVQVSMIYEEDKYIPDTDIINYASDRIKPYMEVEMQDGNWIEFPLGVFLLNSPTRIDDTNKVHREIEAYDQLVILRDIKAYWNHTYTGNVVQNIRLIMTNYDVLINPNLISIPPIQISQNFTFPIGTPYLEIINTMLEAIGYYPLWVDANGVFRSSPYISPANRPADYKYFDDELSVTYNGMESELDLFETANAWVAVSNDLDGNQTFSRIRQNNDQGITSIKSVGRIIVDYREVESIKTQAALDAYVDRLIQESTATYGKIRFKTALMPMHEYQDILHIRYGPLGIDDTFGETAWKMQLKAGGEMEHEARRVVYLR
Physico‐chemical
properties
protein length:721 AA
molecular weight: 80994,18510 Da
isoelectric point:5,58013
aromaticity:0,11650
hydropathy:-0,35381

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPF65046.1
1 721
Domain Start End Length (AA) Confidence
N-terminal 1 71 71 0,7328
Central domain 72 280 210 0,5208
C-terminal 281 721 440 0,3635
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-71
Central
72-280
C-terminal
281-721

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage MVC_VPHSA2
[NCBI] 		3088877 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPF65046.1 [NCBI]
Genbank nucleotide accession
OR670592 [NCBI]
CDS location
range 47522 -> 49687
strand -
CDS
ATGCAAGCATTAGCTCGTGGAGGATATTCAGCTCAACAGGTTATGGATGTCCTTCATGCTAAACACAAGCCAAGAAATGTACGGTTTAGATATGACTTGCTAGACCGCAACCTCAATTATAAAAGAACTTTAAAGAACGTGCTTGAGGGCGAGGTAGCTTTTGCTGCCTTTGCCACTATCAAGCGTACTGGTAAGTTCAAGATTGAGGAAGAATACGTCCCAGCTCATATTGACAGAGCAGAGCGTACAGTAATTACAAAGCTTGGAAGTATCGCAGAAGACCCAGCTTTTAGTTTTGATAACTGGGTTAAGACTGACGCTATAGTCGAGGCAAGCAGTAAAGATTTAATCTTACAGCGTTTTTCTGGAACTATCTCAAACCATGAGTTGGAAACTGGCTGGCGTACAGTTAATATTTACGCAGATGGATGGATGGCTGGTGGCTTCATACCTTGGTACAGCGATACAAAATACAGAGTAGCTCAAGGTGGAGGTTGGCAAGGAAGCTGGGCTCAAGAAATTACTCGCTTGACTAGTGGAGCATACCCTGTAGGTATGCAAACTGGCATTGACTCTGGAGGCGGCTACACAGCAACAAATAGTTTAGTTGCACTGTCTGGTGGTCAGAAGGTTTACTGTTCGTTTTACTTTAGAACATTTAACGGAGAGGTTAATCCAAACTACATCTATGCAATGGGTGGAGGCGGAAACTTTAAATTAGACCAAGTGACTTATACACCTACAGGTTACAATGGTTGGGTGAGGTGCGACGCTGTTGGGACGTGTCCAGCAGGTAGACCGTCTCAAACTTATGGTTTACTTATAGCTTGTGACTCAGCAGTTAACAATGGAATTTGTAACTACGACAATATCTATTATGGAACTAACAGACCTATCTACAGCGGTATGGCTACTAGTCCAATTATTGATGTAAGCAACAAAACTACTCTAGGAAAAGATATTGCACGAGTAAAAAGCAGCGTTTTAATCTTTGGAGACAAAGGAGGAACACCAACAAATCAAGGCTCTTGGATGCCACCAAGAGGAATGAAGGCTCGCTACTCTACTGATGGCGGCACTACTTGGAGCGCTTGGAACAACGTAAGTTACGCTGGCTCAATAGTTCCAGCTGGTACTGACGCAACCAACCTGAGAGTGCAACTTCAATACAGTATGTCTCGTTGGAATAGCTATGACGACGTAAGACTCGGAAACGTTCAAGTGTCAATGATTTACGAGGAAGATAAATATATACCTGACACGGATATTATTAACTATGCAAGTGACCGTATTAAGCCATACATGGAAGTTGAAATGCAAGACGGTAACTGGATAGAGTTTCCTCTGGGAGTATTCTTACTCAACAGTCCAACTCGAATAGATGATACTAACAAGGTACACCGAGAGATTGAAGCTTATGACCAGCTCGTTATACTGAGAGACATTAAGGCTTATTGGAATCACACCTATACAGGAAACGTTGTGCAAAATATCCGTCTCATAATGACAAACTACGATGTACTCATTAACCCTAATCTCATTAGCATACCACCAATACAGATAAGTCAAAACTTTACGTTTCCAATTGGAACACCTTACCTAGAGATAATTAACACAATGCTTGAGGCTATTGGTTACTATCCTCTGTGGGTTGACGCAAATGGTGTATTTAGAAGCTCGCCTTATATCTCGCCAGCTAACCGTCCAGCAGACTACAAATACTTTGATGATGAACTCTCAGTAACCTACAACGGTATGGAAAGCGAACTTGATTTATTTGAGACAGCTAACGCTTGGGTTGCTGTTTCGAATGACCTAGACGGTAATCAAACTTTTTCTAGAATCAGACAGAACAACGACCAAGGCATTACGTCTATTAAGTCAGTAGGACGAATTATAGTAGACTATCGAGAAGTTGAGAGCATTAAGACTCAAGCAGCTCTTGACGCTTACGTTGACCGTTTGATACAAGAAAGTACAGCAACCTATGGAAAGATACGTTTCAAAACAGCTCTAATGCCAATGCATGAGTACCAAGACATTTTACACATTCGTTATGGTCCTCTGGGTATTGATGATACGTTTGGAGAGACAGCTTGGAAGATGCAACTCAAAGCAGGTGGAGAAATGGAGCACGAGGCTAGAAGGGTGGTGTATTTACGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6f7d97a0c23fd4cca12ad0f9356c5c4a91798fcfadd1c7d4469a24d6447c8766
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6710
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Sequence of the Siphoviridae Staphylococcus aureus Phage MVC_VPHSA2 Deepak,S.J., Porteen,K., Wilfred,R., Anbazhagan,S., Elango,A., Senthil Kumar,T., Narendra,B., Sureshkannan,S., Nithya Quintoil,M., Charley,C., Teresa,S. and Raghavendra,A. 2015-02-26 — GenBank