Protein

View in Explore
Genbank accession
WNL51034.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,57
Protein sequence
MALQNSDYFLVNRAGAGYRLAWSELQSASEDSLQIQDVFSYTGSTGATTSAATEVPINIHSGIRLPVAGTGDYTVDGAIRYSPSNSKIELYYGGAWNTASGGTAFSASPPVPATEGDIWYDTDNGRAYVYYNDGDSSQWVELNPAWDGGVPPGAITGDSIADRSIAPIKLTVGGPDWNSNGYGAIGQTADANARFQIRSLNSGSEQKGLQLTQGNVAGSVTQNFSVKQDGVTNTSTIEVNASDSSATSLVIEVGGDDKLVIPSSGNITTAHGITATGGFVGNLTGNVTGYSEQLNRVGVNSSSNSNYRLFFGEANNTAGPSNAYVVTNASRLYYNPSTDKLTVGTVQGNLQGTADNATTLANLPYTEYIRSNANAVFNNIATFNEDVTFNDTVIFNNGTTRFNDNKNLYFGNDNDSRFIFNGSHFYTDLKVGNWYIRDNTTTKFTFGRSAGSFTATGTITAPTFSGNLSGNATTATDATNSTNINVAASSTNANHFVTFTQGSSGNQRPRVDGGLLYNPSTNQLSVNKLYVSESITGPGANLRNLADNEKLYFGTGNDVEYFFNGSNLYTDLKAGNYFIRDGTTTRFTFGRAAGSFTATGTITAPTFSGNLTGNATSATSATSSTNADNVKVDGSTSTNLSLLLGSDTGTGYKRSRRSSNLYWAGSSNTLNTTNLTLTGTAQGGTYKDLTLQGTIKEEVHTITWSSGFAINPSNGSFQLVTLGGSSTPTQSNWDSGESITLMIASPTTSYSISWATLSVKWAGGDAPNIPNTGYLVVQLWKINSDIYGALVGDVV
Physico‐chemical
properties
protein length:795 AA
molecular weight: 83791,89430 Da
isoelectric point:4,75438
aromaticity:0,10063
hydropathy:-0,33786

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CREM2
[NCBI] 		3075959 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNL51034.1 [NCBI]
Genbank nucleotide accession
OR473000.1 [NCBI]
CDS location
range 71020 -> 73407
strand +
CDS
ATGGCTCTCCAAAATAGTGATTATTTCTTGGTTAACCGAGCAGGCGCTGGATATCGCCTAGCTTGGAGTGAGCTACAAAGCGCGTCTGAGGACTCTCTACAGATTCAGGACGTGTTCTCATATACCGGGTCTACTGGAGCTACTACATCTGCAGCAACGGAGGTGCCTATCAATATCCATAGCGGTATTCGCCTACCAGTTGCTGGTACCGGTGACTACACAGTAGACGGTGCTATCCGCTATTCACCTTCGAATAGTAAGATCGAACTGTACTACGGTGGTGCTTGGAATACTGCTTCTGGTGGTACTGCTTTCAGTGCGTCCCCACCAGTCCCTGCTACAGAAGGTGATATATGGTATGATACTGATAACGGACGTGCCTACGTTTACTATAACGACGGAGACTCTTCCCAGTGGGTTGAACTGAACCCCGCTTGGGACGGTGGTGTGCCTCCAGGAGCAATTACCGGTGATAGTATTGCTGACCGCTCTATTGCTCCCATTAAACTCACTGTAGGTGGGCCCGATTGGAATAGTAACGGTTATGGTGCTATTGGTCAGACTGCAGACGCGAACGCAAGATTCCAGATTCGCTCACTGAACTCAGGTTCCGAACAGAAAGGACTTCAACTTACTCAGGGTAACGTTGCTGGTTCTGTTACTCAGAACTTCTCAGTTAAGCAAGACGGTGTTACAAATACCTCAACTATTGAAGTTAACGCTAGTGACTCCAGTGCAACTTCTCTCGTCATTGAAGTTGGTGGTGACGACAAGCTAGTTATTCCGAGTTCCGGTAATATCACAACAGCACACGGTATCACTGCAACCGGTGGTTTCGTAGGTAACTTAACTGGTAACGTAACTGGTTATTCGGAACAACTCAACAGGGTTGGAGTCAACAGTAGCAGCAATTCGAACTATAGACTATTCTTTGGTGAGGCCAACAACACCGCCGGTCCGTCCAACGCCTATGTTGTAACCAACGCCTCTCGCCTCTATTACAACCCGTCCACTGACAAATTGACAGTTGGTACTGTCCAAGGTAATCTTCAAGGTACTGCAGACAACGCAACTACTCTGGCCAACTTGCCATACACGGAGTATATCAGGTCAAACGCCAATGCAGTGTTTAACAATATTGCAACGTTTAACGAAGACGTAACCTTCAACGACACTGTAATCTTTAACAACGGTACAACCAGGTTCAATGACAACAAGAACCTATACTTCGGCAACGACAACGACAGTAGGTTTATCTTTAACGGTAGTCACTTCTACACAGACCTTAAAGTAGGAAACTGGTACATCCGCGACAACACCACAACTAAGTTTACGTTTGGTCGTTCTGCTGGTTCTTTCACAGCAACAGGAACTATTACTGCTCCTACGTTCTCCGGTAACCTTAGTGGCAACGCAACTACTGCTACGGACGCAACCAACTCAACAAATATTAACGTTGCGGCGTCTAGTACTAACGCAAACCACTTTGTAACATTCACACAGGGTTCAAGTGGAAACCAGAGACCAAGGGTCGATGGTGGTCTTCTTTATAACCCCTCAACAAATCAACTAAGCGTCAATAAACTCTACGTCTCTGAGTCCATCACAGGACCTGGTGCAAACCTTCGCAACTTGGCGGATAACGAGAAACTCTACTTCGGTACGGGTAACGACGTTGAGTACTTCTTCAACGGGTCCAACTTGTATACGGACCTTAAAGCAGGTAACTACTTCATTCGTGACGGCACAACTACCCGCTTTACGTTTGGTCGTGCAGCTGGTTCGTTTACTGCAACAGGAACTATTACTGCTCCTACGTTCTCAGGTAACCTCACCGGTAACGCAACCAGTGCCACTAGTGCAACCAGCTCAACAAACGCAGACAACGTTAAAGTTGATGGGTCCACTTCAACTAACCTGAGTCTACTTCTTGGTTCTGATACTGGAACCGGATACAAGAGATCTAGGAGGTCGTCAAACCTATATTGGGCGGGTTCATCCAACACTCTAAATACTACTAACCTAACCCTAACAGGAACTGCTCAGGGTGGTACTTACAAGGACCTTACTCTTCAGGGCACTATTAAAGAGGAAGTACATACAATTACTTGGTCGTCTGGTTTTGCTATCAATCCAAGTAACGGTTCCTTCCAACTGGTCACTCTGGGTGGTAGTAGCACACCAACCCAATCCAACTGGGATTCTGGAGAGTCCATAACACTAATGATTGCATCACCAACTACTTCCTATAGCATAAGTTGGGCAACACTAAGCGTAAAGTGGGCAGGTGGTGACGCACCCAATATTCCAAATACTGGTTATCTTGTTGTTCAACTTTGGAAGATTAACAGCGACATTTATGGAGCACTCGTAGGAGACGTAGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c1ce02468055ddef3942204e61a78c765f2b98eeb27959242c563ba787f29f00
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3189
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of a new cyanomyovirus promps the establishment of a new T4-like cyanophage cluster that is prevalent in the estuarine environment Liu,Y., Zheng,H., Meng,X. and Xu,Y. 2023-11-09 — GenBank