Protein
View in Explore- Genbank accession
- QNL30252.1 [GenBank]
- Protein name
- minor tail protein
- RBP type
-
TSP
- Protein sequence
-
MAIRTLEELLSDLASKVNRLERRLSRRGGPGGITGEMKVWGGVTAPSGWLLVQGQSLLIASYPELYAVLGTRFGGNGTTTFNLPDLRGRVIVGQDTSQTEFDVLGEKSGAKTHTLAQGEIPAHTHGAGPNADGFAAHRTNTSGGFSSILATGATGDVMSWRIPEVNTPNGGAHNNLQPYIVLHHIIKV
- Physico‐chemical
properties -
protein length: 188 AA molecular weight: 19878,17660 Da isoelectric point: 8,15475 aromaticity: 0,05851 hydropathy: -0,18830
Domains
Domains [InterPro]
Coil
Unmapped
3–23
Unmapped
3–23
DC_1651
STR
5–188
STR
5–188
cd22641
STR
10–188
STR
10–188
SSF88874
STR
34–188
STR
34–188
IPR011083
ATT
35–91
ATT
35–91
1
188
Architecture
STR 5-30 | ATT 31-91 | STR 92-188
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
188
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 120 | 120 | 0,3580 |
| Central domain | 121 | 177 | 58 | 0,0013 |
| C-terminal | 178 | 188 | 10 | 0,9886 |
Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary
C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-120
1-120
Central
121-177
121-177
C-terminal
178-188
178-188
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Microbacterium phage ClearAsMud [NCBI] |
2743404 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
QNL30252.1
[NCBI]
Genbank nucleotide accession
MT657336
[NCBI]
CDS location
range 28979 -> 29545
strand +
strand +
CDS
ATGGCGATCCGAACCCTGGAGGAACTGCTCTCCGACCTCGCGAGCAAGGTGAACCGTCTAGAGCGGCGGCTGTCGCGCCGCGGTGGCCCCGGCGGCATCACCGGCGAGATGAAGGTCTGGGGTGGCGTCACGGCCCCGTCCGGCTGGTTGCTCGTGCAGGGCCAGTCGCTCCTCATCGCCTCGTACCCCGAACTGTACGCGGTGCTCGGCACCCGGTTCGGCGGCAACGGCACGACGACGTTCAACCTCCCCGACCTCCGTGGTCGCGTGATCGTCGGCCAGGACACGTCGCAGACCGAGTTCGACGTGCTCGGTGAGAAGTCCGGCGCGAAGACGCACACCCTCGCGCAGGGCGAGATTCCCGCCCACACGCACGGTGCCGGTCCGAACGCCGACGGCTTCGCGGCGCACCGCACGAACACGTCCGGTGGGTTCTCCTCGATCCTCGCGACCGGCGCGACCGGCGACGTGATGTCGTGGCGTATCCCGGAGGTCAACACCCCGAACGGCGGCGCGCACAACAACCTCCAGCCGTACATCGTCCTGCACCACATCATCAAGGTCTGA
Genome Context
Genome Context
Tertiary structure
PDB ID
413c342ffda5d1a3350f0a2ecbe438138317073b876a5879d2078c91996228b6
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50